PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G063800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | Dof | ||||||||
Protein Properties | Length: 203aa MW: 22169 Da PI: 7.7666 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 97.4 | 1e-30 | 62 | 123 | 2 | 63 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 ++k l+cprC+s +tkf +nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+sss Prupe.2G063800.1.p 62 PDKVLPCPRCNSLKTKFYCFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSSS 123 78999****************************************************99875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 8.0E-21 | 49 | 119 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 7.2E-26 | 63 | 120 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 24.279 | 66 | 120 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MHGGPSVKVS CKQDQFFELD KVSENNHHGQ ILENEGEVDC NPEEDCIASD TDDGKEKAFT 60 KPDKVLPCPR CNSLKTKFYC FNNYSVYQPR HFCKSCRRYW TAGGTIRNLP LGTRRHRNKH 120 SSSQYHQVVG EPSAVPVTQG DTLNFVGQQH LSPVQLPAFP KPVNGMREVF IVAFGEVGGV 180 GVVGVVGVVG VVGGVGAFRD YG* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G063800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020412797.1 | 1e-125 | cyclic dof factor 2 | ||||
TrEMBL | A0A251QC88 | 1e-147 | A0A251QC88_PRUPE; Uncharacterized protein | ||||
STRING | EMJ20329 | 1e-124 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3502 | 31 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62430.1 | 2e-30 | cycling DOF factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G063800.1.p |