PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.2G056800.2.p

Common Name

PRUPE_ppa008716mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 323aa MW: 35935.6 Da PI: 8.1728

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G056800.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.8	7.4e-16	252	298	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k+ +el Prupe.2G056800.2.p 252 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KEL 298 79****************************************64.444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.5E-15	241	299	No hit	No description
SMART	SM00338	1.9E-12	248	316	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.76	250	295	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-11	252	297	No hit	No description
CDD	cd14707	7.52E-24	252	306	No hit	No description
Pfam	PF00170	8.1E-13	252	296	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	255	270	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009737	Biological Process	response to abscisic acid
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence Send to blast
MGIQTMGSQG GADGNCKQSQ FQPLARQSSI YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWSAEANQTM GMDIEGTTLV NQATLQRQAS LSLTSALSKK TVDEVWRDIQ QSKNNEEKKS 120 QERQRTLGEM TLEDFLVKAG VVAEAEASSD KKCSAPLAVV DANVASQFPQ GQWLQYQQPQ 180 YQHPQQSMMG VYMPSQPIPP PLHIGAGAIM EVPYPDNQVA LPSPLMGTLS DTQTPGRKRG 240 NPEDIVEKTV ERRQKRMIKN RESAARSRAR KQAYTNELEN KVSRLEEENE RLRKQKELEK 300 VLPSAPPPEP KYQLRRTTSA PF*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppe.19677	0.0	fruit

Expression -- Description ? help Back to Top
Source	Description
Uniprot	DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269\|PubMed:15642716}.
Uniprot	TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269\|PubMed:12376636}.

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00409	DAP	Transfer from AT3G56850	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G056800.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY786307	0.0	AY786307.1 Malus x domestica bZIP transcription factor (ZIP1) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020413451.1	0.0	ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	1e-102	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M5X1D2	0.0	M5X1D2_PRUPE; Uncharacterized protein
STRING	EMJ19887	0.0	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-92	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	Prupe.2G056800.2.p
Entrez Gene	18787415

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]