PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G056800.1.p | ||||||||
Common Name | PRUPE_ppa008716mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 323aa MW: 35935.6 Da PI: 8.1728 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49.8 | 7.4e-16 | 252 | 298 | 5 | 52 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k+ +el Prupe.2G056800.1.p 252 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQ-KEL 298 79****************************************64.444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.5E-15 | 241 | 299 | No hit | No description |
SMART | SM00338 | 1.9E-12 | 248 | 316 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.76 | 250 | 295 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-11 | 252 | 297 | No hit | No description |
CDD | cd14707 | 7.52E-24 | 252 | 306 | No hit | No description |
Pfam | PF00170 | 8.1E-13 | 252 | 296 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 255 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MGIQTMGSQG GADGNCKQSQ FQPLARQSSI YSLTLDEVQN QLGDLGKPLS SMNLDELLKN 60 VWSAEANQTM GMDIEGTTLV NQATLQRQAS LSLTSALSKK TVDEVWRDIQ QSKNNEEKKS 120 QERQRTLGEM TLEDFLVKAG VVAEAEASSD KKCSAPLAVV DANVASQFPQ GQWLQYQQPQ 180 YQHPQQSMMG VYMPSQPIPP PLHIGAGAIM EVPYPDNQVA LPSPLMGTLS DTQTPGRKRG 240 NPEDIVEKTV ERRQKRMIKN RESAARSRAR KQAYTNELEN KVSRLEEENE RLRKQKELEK 300 VLPSAPPPEP KYQLRRTTSA PF* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.19677 | 0.0 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed in embryo during the latest stages of seed maturation. {ECO:0000269|PubMed:15642716}. | |||||
Uniprot | TISSUE SPECIFICITY: Predominantly expressed in seeds. {ECO:0000269|PubMed:12376636}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G056800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY786307 | 0.0 | AY786307.1 Malus x domestica bZIP transcription factor (ZIP1) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020413451.1 | 0.0 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 1e-102 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | M5X1D2 | 0.0 | M5X1D2_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19887 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1320 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 5e-92 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G056800.1.p |
Entrez Gene | 18787415 |
Publications ? help Back to Top | |||
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