PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G048400.1.p
Common NamePRUPE_ppa024496mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 337aa    MW: 36067.5 Da    PI: 5.6538
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G048400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016146168123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ++C+ C++ Fs++  L  H++ H
  Prupe.2G048400.1.p 146 FTCNFCKREFSTSQALGGHQNAH 168
                         89******************988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576672.35E-6143173No hitNo description
Gene3DG3DSA:3.30.160.603.5E-4144172IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015711.531146173IPR007087Zinc finger, C2H2
PROSITE patternPS000280148168IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    Send to blast
MAEEPRVEHL SPTSEASNIS ATSDDLPPTK KDGLENLDRK MKEKIVIDDS DDDDTQQPPP  60
PPVISSSSSP SPSSRLRLDL KLCNNESAHG LGSSSSRLEL SLFNPSNLGS SNPGSSNPVS  120
EYSQPNETTD ENPRGSDDKR SQPRVFTCNF CKREFSTSQA LGGHQNAHKQ ERALAKRRQG  180
GLENMGGVLG HSPFPYYNPY SSLSSPSLYG SFNRSLGVRM DSMIHKPSYP WSSTLGFGRF  240
GPSSEAWSSR AGSLLNFQST IDRLNLDGLH ANAPNGISGL PGTSSASRFD KEIGVVGNFG  300
GSSSNSEINR PILGDLPREP PTSDTDAAGL DLSLKL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G048400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219780.10.0zinc finger protein 6
TrEMBLM5X4Y30.0M5X4Y3_PRUPE; Uncharacterized protein
STRINGEMJ209790.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18223074
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01860.15e-17C2H2 family protein