PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G013600.1.p
Common NamePRUPE_ppa024128mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 374aa    MW: 43409 Da    PI: 7.8529
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G013600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1591.6e-1858143291
                FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                         +Y+eY+k++GF vrk++s+k  ++ge +  t  C +egk ++++++     +++++ ++gCka+++ +   dg+w++++++l+HnH+++p
  Prupe.2G013600.1.p  58 YYREYGKQLGFPVRKRTSQKG-DEGELKYVTISCGREGKYKSKSSN---VLKPHPSIKIGCKARVRASIILDGRWQINSINLDHNHDMSP 143
                         8***************99998.8888***************99888...899**********************************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.5E-1558143IPR004330FAR1 DNA binding domain
PfamPF105517.9E-17287338IPR018289MULE transposase domain
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MSSSSFTSSY INQEEDGVQM EKNDGEAVSE EPELENRENV EEPRVGMTFN NIDDIVVYYR  60
EYGKQLGFPV RKRTSQKGDE GELKYVTISC GREGKYKSKS SNVLKPHPSI KIGCKARVRA  120
SIILDGRWQI NSINLDHNHD MSPTKARYFR CHRTISSYMK RRIELNDRAG IRLNKSYNSL  180
VVEAGGHENI SFLEKDCRNY IENVRRLRLG EGDATAIQTY FLNMQAQNSN FFYAIDLDQD  240
GRLRNVFWAD ARSRAAYKEF GDVVTFDTTY LTNKYDMPFA PFVGDIDAFI WLFKSWLTCM  300
HEHAPRGIIT DQDKAMKNAI EIIFPNTRHR WCLWHIMNKF PSKLNRYKQY EAIMYALQSI  360
VYGSLEKVEF EEG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G013600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020417960.10.0protein FAR1-RELATED SEQUENCE 6
TrEMBLM5X4F90.0M5X4F9_PRUPE; Uncharacterized protein
STRINGEMJ209420.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF4030530
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.17e-61FAR1 family protein