PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.2G009100.2.p | ||||||||
Common Name | PRUPE_ppa006134mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bHLH | ||||||||
Protein Properties | Length: 427aa MW: 47695.9 Da PI: 8.0994 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.3 | 8.9e-11 | 361 | 406 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k + ae+L +Ave+Ik+Lq Prupe.2G009100.2.p 361 SIAERMRRTRISERMKKLQDLFPNM----DKQINTAEMLDLAVEFIKDLQ 406 689*********************7....688*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.764 | 355 | 405 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.97E-14 | 358 | 418 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.11E-10 | 359 | 410 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 7.0E-13 | 360 | 414 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.7E-8 | 361 | 406 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.1E-11 | 361 | 411 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 427 aa Download sequence Send to blast |
MSSLLYKYNP NFKCSEAELR KNHTEFMDSN IFQQQQLHQQ LQQPQQQSSG LMRYRSAPSS 60 FLMDLVDSNG GVGCEDSRYL RPSSPEVETV LARFISSCNE PDHHDNGANS LQHQFEERAV 120 KQEAGDSVSK QNGYSNSSHM MYQAQQVHAL DNNSFAAINS TGLENSMQSK IGVGNRSNLV 180 RQSSSPAGFF PDLTVDNGFN VMKDGASFRA GNGINGEASP SSTSRLNNQL NFSSGPSSYP 240 RRMPRIAEME NGNMGDGSQQ DQGLGNASNS HCISNFPNDS WDISSFNDLK RGRNNDGNKF 300 SNSTAFETQN NDFGHRNHGL THHLSLPKHF EMPAMEKLLQ FEESIPCKIR AKRGFATHPR 360 SIAERMRRTR ISERMKKLQD LFPNMDKQIN TAEMLDLAVE FIKDLQKQVK TLGDIKAKCS 420 CSSKQK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.2G009100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007218046.1 | 0.0 | transcription factor bHLH130 | ||||
TrEMBL | M5X189 | 0.0 | M5X189_PRUPE; Uncharacterized protein | ||||
STRING | EMJ19245 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42280.1 | 1e-63 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.2G009100.2.p |
Entrez Gene | 18786993 |