PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G575800.1.p | ||||||||
Common Name | PRUPE_ppa006939mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 390aa MW: 43968.4 Da PI: 8.0433 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24 | 8.7e-08 | 243 | 289 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++L+ae + ele l+++ l +e+ Prupe.1G575800.1.p 243 AQRSRVRKLQYIAELERNVQALQAEGSGVTAELEFLNQQNLILSMEN 289 89**********************************99998887776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0011 | 232 | 291 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.30E-14 | 235 | 282 | No hit | No description |
SuperFamily | SSF57959 | 1.63E-5 | 243 | 285 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.5E-6 | 243 | 285 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 390 aa Download sequence Send to blast |
MANSKSSNIR NFMYSGKHPL LPPKSPFPSV SPSYADYVLS PAFGSKTVQK PREGNAHHQR 60 TSSESLLIEE QPSWLDDLLN EPDTPIRRGG HRRSSSDSFA YVDTSNASNI DYAAQDEYKY 120 HHMISAPSWG SHDFDPQKDL RHASLYTELN LVKQKNKAWE SSLNSVNNMS SLPSVKDNIV 180 LQSSGSLSTP QEADGFASTA SEKQDQVESG PHDPKASSEK KDNSNAKLYA SETDAKRAKQ 240 QFAQRSRVRK LQYIAELERN VQALQAEGSG VTAELEFLNQ QNLILSMENK ALKQRLESIA 300 QEQLIKYLEQ ELLEREIGRL RALYQQQQQH HQQQQQQQQQ QQQQQQQQQP SSSHRRSNSK 360 DLDSQFANLS LKHKDANAGR DPVTGTLRI* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.5025 | 5e-83 | fruit |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G575800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007223048.1 | 0.0 | uncharacterized protein At4g06598 | ||||
Swissprot | Q8W3M7 | 7e-65 | Y4598_ARATH; Uncharacterized protein At4g06598 | ||||
TrEMBL | M5XDQ1 | 0.0 | M5XDQ1_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24247 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5123 | 26 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 4e-99 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G575800.1.p |
Entrez Gene | 18792971 |
Publications ? help Back to Top | |||
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