PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G574400.1.p | ||||||||
Common Name | PRUPE_ppb014811mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 119aa MW: 13757.8 Da PI: 8.3368 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31.6 | 2.9e-10 | 6 | 94 | 2 | 87 |
EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 +k lt dv+++ + lp + ++ +g+ ++ l+++d g We+ +++ ++++ ++ ++GW +Fv+ +gLk+gD +v+ + + Prupe.1G574400.1.p 6 EKCLTETDVGSR--FALPISWLSVLppieQGS--HEFHLQVTDGFGFFWEFCCSIrrvGRYRKPVFQSEGWLKFVNHKGLKVGDKIVLDSEAN 94 688888888886..699999996668775444..446799999999*******885444444448888*******************995433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd10017 | 1.45E-10 | 4 | 89 | No hit | No description |
SuperFamily | SSF101936 | 7.65E-11 | 5 | 94 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.0095 | 5 | 107 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.7E-8 | 6 | 94 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.9E-11 | 6 | 106 | IPR015300 | DNA-binding pseudobarrel domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 119 aa Download sequence Send to blast |
MAARYEKCLT ETDVGSRFAL PISWLSVLPP IEQGSHEFHL QVTDGFGFFW EFCCSIRRVG 60 RYRKPVFQSE GWLKFVNHKG LKVGDKIVLD SEANDFRGTQ FRIRAQKLNK ECDQWLDV* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G574400.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021824681.1 | 5e-34 | uncharacterized protein LOC110765763 | ||||
TrEMBL | M5XUX6 | 3e-83 | M5XUX6_PRUPE; Uncharacterized protein | ||||
STRING | EMJ22915 | 6e-84 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2060 | 7 | 78 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G574400.1.p |
Entrez Gene | 18792230 |