PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G574300.1.p
Common NamePRUPE_ppa023244mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 119aa    MW: 13702.7 Da    PI: 6.5243
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G574300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.6e-1017951488
                        T-EE--HHH.HTT...---..--SEEEEEETTS..-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                  B3 14 grlvlpkkfaeeh...ggkkeesktltledesg..rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88
                        grl +p + + ++      +++s+++++e ++g    W++ +++  +++++ ++ ++GW +Fv+a++L++gD vv+    ++
  Prupe.1G574300.1.p 17 GRLAVPSEWL-KIlppF--EKGSFEVQFEVTDGvgFYWQFCCSIrkERYPKPVLQSAGWLKFVNAKDLQAGDKVVLDTRADD 95
                        6788888888.555642..3467777777777755889999966445555558888*******************9954333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.108.5E-12694IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019363.53E-10789IPR015300DNA-binding pseudobarrel domain
CDDcd100172.82E-11889No hitNo description
PfamPF023621.2E-71695IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MAHLELEKYL TETDIEGRLA VPSEWLKILP PFEKGSFEVQ FEVTDGVGFY WQFCCSIRKE  60
RYPKPVLQSA GWLKFVNAKD LQAGDKVVLD TRADDFRGTK IRIRAQKDLD RNGHWVDV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G574300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021824681.14e-36uncharacterized protein LOC110765763
TrEMBLM5Y6L73e-82M5Y6L7_PRUPE; Uncharacterized protein
STRINGEMJ275905e-83(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2060778