PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G527100.1.p
Common NamePRUPE_ppa009679mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 278aa    MW: 29916.2 Da    PI: 6.9566
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G527100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer100.99e-3266122259
         ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                         + vrY+eClkNhA+s+GghavDGC+Ef+++ g+egt++al CaAC+CHRnFHR+e+e 
  Prupe.1G527100.1.p  66 TMVRYRECLKNHAVSIGGHAVDGCCEFLAA-GDEGTMDALICAACNCHRNFHRKEPEG 122
                         579**************************9.999*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF047705.0E-2968120IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
TIGRFAMsTIGR015664.1E-2769119IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
ProDomPD1257745.0E-2169121IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152326.59270119IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
SuperFamilySSF466891.73E-20203275IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.6E-31214276IPR009057Homeodomain-like
TIGRFAMsTIGR015653.3E-27217273IPR006455Homeodomain, ZF-HD class
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MEFEEHEEHE EEMEMEMQPA PPGYDSAGAS SRAKMGPARE GTVSTARKRG PTATAAITNT  60
TTTLTTMVRY RECLKNHAVS IGGHAVDGCC EFLAAGDEGT MDALICAACN CHRNFHRKEP  120
EGELIHHHQG GTTGPYHQSG GSHHHLLQHQ FSSAFYRPPP PPSGYLITSP HARPTLTLPA  180
ASGGGGGSHS RDDGEDVSNP SSSGGGGGGG GGFGINKKRH RTKFTQEQKE KMLEFAEKVG  240
WRIQKHDEAA VEEFCGETGV KRQVLKVWMH NNKHTLA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wh7_A3e-282182751875ZF-HD homeobox family protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G527100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222197.10.0zinc-finger homeodomain protein 2
RefseqXP_020414808.10.0zinc-finger homeodomain protein 2
TrEMBLA0A251RH230.0A0A251RH23_PRUPE; Uncharacterized protein
STRINGEMJ233960.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20634253
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-60homeobox protein 22