PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G473800.3.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 960aa    MW: 104969 Da    PI: 7.1439
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G473800.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR51.32.3e-16527564340
                 TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                         +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N +
  Prupe.1G473800.3.p 527 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 564
                         699*********************************76 PP
2TCR50.25e-16604642139
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                         ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN 
  Prupe.1G473800.3.p 604 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 642
                         589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.2E-14525566IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.106526644IPR005172CRC domain
PfamPF036383.0E-12528562IPR005172CRC domain
SMARTSM011146.8E-17604645IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.5E-11606641IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 960 aa     Download sequence    Send to blast
MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP GLNSPPLVFT  60
SPRINSHRNT SFLKRPQYQP LSSAEKSKTQ DEAKKFLDGP VDPKITQLHM RLITDSQDCE  120
TKIRVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN  180
KHNTGTDLGT EAKAPSEQAK EDLEGKQTFD AKPVKIIEQS DGELPYDECP NIESGLSIDN  240
AYKREYRQHL HDQLQDRGGK HQDDCDHTPQ SPPGRLQIVQ VYENSAENVG AISKGMIGNM  300
ILHAPKARSE QGGMHRRCLQ FEEAPPCATG KRDCSLSSIQ EVNNSEPPSS MGESKLVKLS  360
YADLKSTSKR QMGTPLPPRC GGNSPSTVPK PSGIGLHLNS IVNAAPLVRG TTRSIKLADH  420
YIGVQVMKSA SVMSSHLPDN VRCRSISLNM VEKDSAGPED RDESETSIAA SSAVPSSPHT  480
VVFEGHGPTH EKRGFDAENI DDYEECKQSS PKKKRKKTSS TKDSDGTKRC NCKKTKCLKL  540
YCDCFAAGVY CAESCACQGC FNITDYEDTV LETRQHIESR NPLAFAPKIV QHEEEIQFTP  600
SSARHKRGCN CKKSMCLKKY CECYQANVGC SSGCRCDGCK NVYGRKGEYI PIEHGVGKDN  660
ISDKAGKERI ESTFHEKLEM VATKKDILST ELYDSHNLTP LAPSFQCSDH ANNVPKSPCL  720
PTSYLPSPES DLTIISSYEK STRSPLRHSE SSDILLETSK ELSDLGSYNW RVDYDNIGIV  780
DTFSPRCDAA PTTCHITPMS DLCSMAMASS TSSKTSDWTN ASQVQLCPGS HGLSSDSSLH  840
RRSSPVTPMT RLGGTKSFQG LDFENGLYDI LQDDTPEILK DSSTPIRSLK VSSPNKKRVS  900
PPHSHNHELG ASSSGALRSG RKFILKAVPS FPPLTPCIGS KGSSIIQNMS NLQDKGRKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A4e-2053064214121Protein lin-54 homolog
5fd3_B4e-2053064214121Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1512516KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G473800.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411165.10.0CRC domain-containing protein TSO1 isoform X1
TrEMBLA0A251RGL40.0A0A251RGL4_PRUPE; Uncharacterized protein
STRINGXP_008229954.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.16e-53TESMIN/TSO1-like CXC 2