PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G473800.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 958aa    MW: 104728 Da    PI: 7.1439
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G473800.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR51.32.3e-16525562340
                 TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                         +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N +
  Prupe.1G473800.2.p 525 TKRCNCKKTKCLKLYCDCFAAGVYCAESCACQGCFNIT 562
                         699*********************************76 PP
2TCR50.24.9e-16602640139
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                         ++k+gCnCkks ClkkYCeC++a++ Cs+ C+C++CkN 
  Prupe.1G473800.2.p 602 RHKRGCNCKKSMCLKKYCECYQANVGCSSGCRCDGCKNV 640
                         589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.2E-14523564IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.106524642IPR005172CRC domain
PfamPF036383.0E-12526560IPR005172CRC domain
SMARTSM011146.8E-17602643IPR033467Tesmin/TSO1-like CXC domain
PfamPF036382.5E-11604639IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 958 aa     Download sequence    Send to blast
MDSPEIRKIK ANTTSSSDSP PVQDSPVFSY INNLSPIQPV KASHLAQGFP GLNSPPLVFT  60
SPRINSHRNT SFLKRPQYQP LSSAEKSKTQ DEAKKFLDGP VDPKITQLHM RLITDSQDCE  120
TKIRVESQQC SSSEGVDEYL ADPSEVDCVD STQSASPCLK QSNNVPETFT GSKETTLYDN  180
KHNTGTDLGT EAKAPSEQAK EDLEGKQTFD AKPVKIIEQS DGELPYDECP NIESGLSIDN  240
AYKREYRQHL HDQDRGGKHQ DDCDHTPQSP PGRLQIVQVY ENSAENVGAI SKGMIGNMIL  300
HAPKARSEQG GMHRRCLQFE EAPPCATGKR DCSLSSIQEV NNSEPPSSMG ESKLVKLSYA  360
DLKSTSKRQM GTPLPPRCGG NSPSTVPKPS GIGLHLNSIV NAAPLVRGTT RSIKLADHYI  420
GVQVMKSASV MSSHLPDNVR CRSISLNMVE KDSAGPEDRD ESETSIAASS AVPSSPHTVV  480
FEGHGPTHEK RGFDAENIDD YEECKQSSPK KKRKKTSSTK DSDGTKRCNC KKTKCLKLYC  540
DCFAAGVYCA ESCACQGCFN ITDYEDTVLE TRQHIESRNP LAFAPKIVQH EEEIQFTPSS  600
ARHKRGCNCK KSMCLKKYCE CYQANVGCSS GCRCDGCKNV YGRKGEYIPI EHGVGKDNIS  660
DKAGKERIES TFHEKLEMVA TKKDILSTEL YDSHNLTPLA PSFQCSDHAN NVPKSPCLPT  720
SYLPSPESDL TIISSYEKST RSPLRHSESS DILLETSKEL SDLGSYNWRV DYDNIGIVDT  780
FSPRCDAAPT TCHITPMSDL CSMAMASSTS SKTSDWTNAS QVQLCPGSHG LSSDSSLHRR  840
SSPVTPMTRL GGTKSFQGLD FENGLYDILQ DDTPEILKDS STPIRSLKVS SPNKKRVSPP  900
HSHNHELGAS SSGALRSGRK FILKAVPSFP PLTPCIGSKG SSIIQNMSNL QDKGRKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A4e-2052864014121Protein lin-54 homolog
5fd3_B4e-2052864014121Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1510514KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G473800.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411166.10.0CRC domain-containing protein TSO1 isoform X2
TrEMBLA0A251RE800.0A0A251RE80_PRUPE; Uncharacterized protein
STRINGXP_008229954.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.16e-53TESMIN/TSO1-like CXC 2