PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G431100.2.p | ||||||||
Common Name | PRUPE_ppa007930mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 366aa MW: 39820.1 Da PI: 10.0098 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 99.3 | 2.3e-31 | 293 | 350 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+ Prupe.1G431100.2.p 293 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 350 99************************999****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 8.3E-17 | 243 | 289 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.5E-32 | 279 | 350 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.503 | 286 | 352 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.57E-26 | 288 | 351 | IPR003657 | WRKY domain |
SMART | SM00774 | 2.4E-36 | 291 | 351 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.2E-26 | 293 | 349 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005516 | Molecular Function | calmodulin binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence Send to blast |
MDTLVIRPNS FAAQMEENAV KEAASAGIQS VEKFISLISQ HHHQFQDSSF SSSSNPEAAT 60 EYKAVADMAV NKFRKVISLL DKGRTGHARF RRAPVTPSPP PPPPPPPPPQ KTETQIPRPS 120 IQEPHNPRTD QPPGFKTEQS SAFKVYCPTP SVRLPPLPHN PHLKTTPVVL TKSVGCAERK 180 LDAPTTINFS PSPSISAANS YMSSLTTGDA EGSVQHSMSS GFQFTNMSQS SSGKPPLSSS 240 SLKRKCNSMD DVAALRCGSS SGRCHCSKKR KSKVKRVVRV PAISMKMADI PPDDYSWRKY 300 GQKPIKGSPH PRGYYKCSSQ RGCLARKHVE RALDDPTMLI VTYEGDHNHS HTGTDPTPDL 360 VLESS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-20 | 288 | 349 | 14 | 74 | Probable WRKY transcription factor 4 |
2lex_A | 4e-20 | 288 | 349 | 14 | 74 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.3785 | 0.0 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: In young, mature and senescent leaves. {ECO:0000269|PubMed:11722756}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G431100.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409832.1 | 0.0 | probable WRKY transcription factor 7 isoform X2 | ||||
Swissprot | Q9STX0 | 1e-107 | WRKY7_ARATH; Probable WRKY transcription factor 7 | ||||
TrEMBL | A0A251RBX8 | 0.0 | A0A251RBX8_PRUPE; Uncharacterized protein | ||||
STRING | EMJ23456 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 1e-79 | WRKY DNA-binding protein 7 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G431100.2.p |
Entrez Gene | 18789355 |