PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G383200.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 420aa MW: 46447.2 Da PI: 7.0665 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 61.5 | 2.8e-19 | 48 | 154 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 + F+ tdeel L k ++g++l+ +vi++++ y++ P++Lp + wyf +++++k t+ gyW+++g+ +++s Prupe.1G383200.1.p 48 DIGFQCTDEELC-ISLGKIISGSPLPG-NVIEDANPYQLVPSNLP------DGFWYFIHSNENK---------PTNFGYWRTKGEACRIFS 121 56799******9.66***********9.99**************9......3568888887654.........4778************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g + tL fy+g+ap+ +ktdWvm+ey l Prupe.1G383200.1.p 122 -NSSITGWRATLEFYQGQAPNESKTDWVMQEYWL 154 .999****************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.09E-26 | 41 | 177 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.194 | 45 | 177 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-10 | 48 | 153 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence Send to blast |
MALIGGSFSV VERLRVEIRN EQEKAVALWS SQNPKVIMCP QSATLPADIG FQCTDEELCI 60 SLGKIISGSP LPGNVIEDAN PYQLVPSNLP DGFWYFIHSN ENKPTNFGYW RTKGEACRIF 120 SNSSITGWRA TLEFYQGQAP NESKTDWVMQ EYWLTQKKLS EDSKAKEPRS LCRVFCSNEQ 180 KLNCKNLQKM VSSDSATYSA HSAVPRAKNC TSHSSTSKPQ VSKDNERGTL IVTERVPDHD 240 VQIMPEIDYV SRGDYLELLD LDTPASFSFS SDSSCLTMSS DECFDSLALL EELEPKNSQD 300 LVNKNAGCKF SISAPPRPDE LVIFAASSGS FSKSPSEERV KTHSPIPGSA VCGKISGKTS 360 NNMNRIQKPD CRNEGGPSTS HNVDVSPSSH TASQEGKRRA RTIGRTEKLK KKYFCFMPF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G383200.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007223100.1 | 0.0 | NAC domain-containing protein 79 | ||||
Refseq | XP_020410597.1 | 0.0 | NAC domain-containing protein 79 | ||||
TrEMBL | A0A251R9L7 | 0.0 | A0A251R9L7_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24299 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10588 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 8e-20 | NAC domain containing protein 28 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G383200.1.p |