PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G373700.3.p
Common NamePRUPE_ppa005361mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 402aa    MW: 44746.4 Da    PI: 6.1544
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G373700.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-093243611954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  Prupe.1G373700.3.p 324 FEHflHPYPNDSEKLLLASQTGLSKNQVSNWFINARVR 361
                         664459******************************88 PP
2BELL99.62.5e-32187257272
                BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         ++elq++ a L++lle+V++r ++y++q++ v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+dai+++i
  Prupe.1G373700.3.p 187 KHELQARLANLITLLEQVEDRCEKYYHQMEEVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDAIVSHI 257
                         79******************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.5E-35117255IPR006563POX domain
PfamPF075268.1E-41122254IPR006563POX domain
PROSITE profilePS5007111.807302365IPR001356Homeobox domain
SMARTSM003894.1E-8305369IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.0E-26310371IPR009057Homeodomain-like
SuperFamilySSF466893.59E-17311372IPR009057Homeodomain-like
CDDcd000863.33E-11311366No hitNo description
PfamPF059201.5E-16322361IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MSRSVALVQA PTGAEDSDMN NQTRHLMDLP RAATENQAQR LSLSLGSHML VPSVQYRQRS  60
MNSDLMSHNH FIIGEESGEA CNPGVEHVSD EYCFIGSALA SSSNSLSRSC STSYGTESLA  120
DVIGNSRYLK PAQSLLDEIV NVGGKQVDIS NEKHVGKLYG EGRRGAMGFS SELKAELCCN  180
GLMSADKHEL QARLANLITL LEQVEDRCEK YYHQMEEVMS SFEMVVGEGA AKSYTALALK  240
AMSRHFCSLR DAIVSHIYAE KRKLLQDVPK ISSGLSQLNL FDRECRHKRM SLQQLGIFQS  300
QRQAFRPIRG LPETSVAILR TWLFEHFLHP YPNDSEKLLL ASQTGLSKNQ VSNWFINARV  360
RLWKPMIEEM YKEEFGESSE DSNSFAGGSM TGEGNTDHTE D*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-16311369563Homeobox protein Meis2
4xrm_B2e-16311369563Homeobox protein Meis2
4xrs_A2e-16311368158Homeobox protein Meis1
4xrs_B2e-16311368158Homeobox protein Meis1
5bng_A2e-16311369159Homeobox protein Meis2
5bng_B2e-16311369159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G373700.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223034.10.0BEL1-like homeodomain protein 11
RefseqXP_020424621.10.0BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-105BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A251R9970.0A0A251R997_PRUPE; Uncharacterized protein
STRINGEMJ242330.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-108BEL1-like homeodomain 11