PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G341300.1.p

Common Name

PRUPE_ppa003517mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 575aa MW: 62625.9 Da PI: 6.94

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G341300.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.5	0.00028	470	502	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YIk Lq Prupe.1G341300.1.p 470 DRITALQQIVSPF-----GKTDTASVLYEAIQYIKFLQ 502 6788888888887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.29	452	501	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.32E-9	467	510	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.6E-8	467	508	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.27E-4	470	506	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence Send to blast
MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ 60 QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN 120 GEQVSDNHIW NHVLLLNHAC RSVNGNSDLH HNDHDVGENF LDALSSKSLS TDHVMYEPAC 180 DYLKKLDNST WEFTKYVSAA SNNFNSFEKQ LNGGFMENNN MNNNVNIENE RLTKLSNLVS 240 TWSIAPPEPQ LVMDHDHHHY LKPQAFINND STSCDAQMGN NNITNRNSGS SLFSCYGSKV 300 EAACVAGGGG GGALHGITPS FGNNTNGIEY QIGLNNVNAM VADHHNGKYF YGNGSILPDS 360 YSSCGATSAG ARNFADVISF SSRLGNKSAL VDIHAPKPCF KSSNLSDQYS KKQASSTRVS 420 SGRGQGIANE GKKKRTDDTS SETVLKKPKQ ETSTVSSSVK MQAPKVKLGD RITALQQIVS 480 PFGKTDTASV LYEAIQYIKF LQDQVHVLLS SPYLKTNSHK DPWATDRKDH KGDAKVDLKN 540 KGLCLVPISC TPQVYRENTG SDYWTPTYRG CLYR*

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence Send to blast

MAEECRESTS CVAISSSSPQ LAQPNWWDLH AAAGAGAAGS QLSSWSNLGI NPWQPQPPQQ  60
QPNQKYSNSS NNCDDVDQDV SISSTSFTNA SNHSSLSVDS SRRLQVADQR SASPNNDMIN  120
GEQVSDNHIW NHVLLLNHAC RSVNGNSDLH HNDHDVGENF LDALSSKSLS TDHVMYEPAC  180
DYLKKLDNST WEFTKYVSAA SNNFNSFEKQ LNGGFMENNN MNNNVNIENE RLTKLSNLVS  240
TWSIAPPEPQ LVMDHDHHHY LKPQAFINND STSCDAQMGN NNITNRNSGS SLFSCYGSKV  300
EAACVAGGGG GGALHGITPS FGNNTNGIEY QIGLNNVNAM VADHHNGKYF YGNGSILPDS  360
YSSCGATSAG ARNFADVISF SSRLGNKSAL VDIHAPKPCF KSSNLSDQYS KKQASSTRVS  420
SGRGQGIANE GKKKRTDDTS SETVLKKPKQ ETSTVSSSVK MQAPKVKLGD RITALQQIVS  480
PFGKTDTASV LYEAIQYIKF LQDQVHVLLS SPYLKTNSHK DPWATDRKDH KGDAKVDLKN  540
KGLCLVPISC TPQVYRENTG SDYWTPTYRG CLYR*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G341300.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007222467.1	0.0	transcription factor bHLH111
TrEMBL	A0A251R7F8	0.0	A0A251R7F8_PRUPE; Uncharacterized protein
STRING	EMJ23666	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF10116	26	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	2e-55	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G341300.1.p
Entrez Gene	18791617