PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G331600.2.p | ||||||||
Common Name | PRUPE_ppa004950mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 405aa MW: 44604.3 Da PI: 8.4159 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.7 | 1e-05 | 124 | 146 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+Cp+Cg+sF++ ++ +H t+ Prupe.1G331600.2.p 124 YECPICGQSFRSEDEVSVHVDTC 146 99*****************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.10.20.90 | 5.1E-5 | 19 | 61 | No hit | No description |
PROSITE profile | PS50157 | 8.974 | 124 | 153 | IPR007087 | Zinc finger, C2H2 |
CDD | cd09212 | 1.53E-20 | 178 | 273 | No hit | No description |
SuperFamily | SSF143503 | 4.18E-18 | 188 | 262 | IPR018997 | PUB domain |
SMART | SM00580 | 7.0E-20 | 191 | 258 | IPR018997 | PUB domain |
Pfam | PF09409 | 3.8E-16 | 192 | 265 | IPR018997 | PUB domain |
SuperFamily | SSF54236 | 1.58E-5 | 338 | 401 | IPR029071 | Ubiquitin-related domain |
Gene3D | G3DSA:3.10.20.90 | 5.1E-5 | 355 | 399 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence Send to blast |
MGDKFKEFIK NPFSSSSSGK FKGQGRVLGS SSSGPANSAL LRQSQAPQSK PKPNPVSNSN 60 SNSSSSAASP NPKPSPQKTQ NLDQNKPEFS NNSKPNRKEN GFDPFDSLIT PGKRSQNGYT 120 LNVYECPICG QSFRSEDEVS VHVDTCVNTS VDNKSAEGLG VSGSEDIGVG SSRSELEARI 180 GTFASGNPAT GSVEVVLRLL RNIVKEPENV KFRKIRMSNP KIREAIGEVV GGIELLEFVG 240 FELKEEEGEM WAMMEVPSEE QISLMKNGIA LLEPPKVQEL QKIENSPSID TPKVDEQIEP 300 KKVDRQTKVF FSVSESVAAR IELPESFYNL SAMELKREAE TRKKKIEDSQ MLIPRSYKEK 360 QAKAAKNRYR RTVVRIQFPD GVVLQGVFSP WESTSSLYEI MISL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Facilitates the interaction of SYP31 and CDC48A, thereby regulating an CDC48A membrane-associated function (Ref.8). Appears to act as a negative regulator mediating the powdery mildew-plant interaction (PubMed:19176722, PubMed:23301616). {ECO:0000269|PubMed:19176722, ECO:0000269|PubMed:23301616, ECO:0000269|Ref.8}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G331600.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced in response to powdery mildew and by benzothiadiazole (BTH) treatment. {ECO:0000269|PubMed:19176722}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007222657.1 | 0.0 | plant UBX domain-containing protein 2 | ||||
Swissprot | Q9ZU93 | 1e-127 | PUX2_ARATH; Plant UBX domain-containing protein 2 | ||||
TrEMBL | A0A251R7U4 | 0.0 | A0A251R7U4_PRUPE; Uncharacterized protein | ||||
STRING | EMJ23856 | 0.0 | (Prunus persica) |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G331600.2.p |
Entrez Gene | 18789691 |
Publications ? help Back to Top | |||
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