PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G313200.2.p
Common NamePRUPE_ppa010885mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 209aa    MW: 23692 Da    PI: 8.1376
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G313200.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.22.9e-08117164455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L+ l+P +     k +  a +L  ++ Y++sLq
  Prupe.1G313200.2.p 117 SHSLAERVRREKINERLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 164
                         8*************************8....355888999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.30E-10111168No hitNo description
SuperFamilySSF474591.07E-16111182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.212113163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.2E-16113174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.9E-5117164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.3E-8119169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:2000488Biological Processpositive regulation of brassinosteroid biosynthetic process
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MELIDSLCEL ENLSANHHEI MALSNGMSFS DHQRQTNHLP LNFIHDNIIQ SFSHSDDPNH  60
DVLVAHSTSL TGDFAQESEK GKPLGGRKRK RNKIDKDGEK LKEVIHVRAK RGQATDSHSL  120
AERVRREKIN ERLRCLQNLV PGCYKTMGMA VMLDVVISYV QSLQNQIEFL SMKLSAASVY  180
YDFNAPGVDA LDTMQGQIMH MGRYKKRW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G313200.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223899.11e-144transcription factor bHLH75
TrEMBLM5XG441e-155M5XG44_PRUPE; Uncharacterized protein
STRINGEMJ250981e-143(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-52bHLH family protein