PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G306300.1.p | ||||||||
Common Name | PRUPE_ppa007222mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 384aa MW: 42452 Da PI: 8.0602 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.2 | 6.7e-32 | 208 | 263 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGGs+ AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Prupe.1G306300.1.p 208 KQRRNWSPELHRRFLHALQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLH 263 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 14.649 | 205 | 265 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.6E-28 | 206 | 266 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 2.51E-18 | 206 | 266 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.0E-26 | 208 | 263 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 7.4E-8 | 210 | 261 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MESTEQMQAS RLGFRDYVKA LEEERHKIQV FQRELPLCLE LVTQAIERCK QQLSDTTTDY 60 MHGQSECSEQ TSSEGHVFEE FIPLKRTSSS DSDDDEVQES QEPKTNDKDK TNGDKIKSDW 120 LRSAQLWNTT PDPPLKDELP RKALVMEVKR NGGAFQPFQR EKSVGKTNRP VAKVPASAPA 180 TSSTTDTVSG GSGESHKKEE KDGQGQRKQR RNWSPELHRR FLHALQQLGG SHAATPKQIR 240 ELMKVDGLTN DEVKSHLQKY RLHTRRPTPT MHNNNNSDNN TQAPQFLVVG GIWVPPQDYA 300 AVAATTASGE ATRVAAANGI YAPVATSPST VTPVSPPSLM QRPRPKRPES SHSDERVSHS 360 EGRGHCNSTA TSSSTHTTAS PVL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-13 | 208 | 261 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-13 | 208 | 261 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-13 | 208 | 261 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-13 | 208 | 261 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 4e-13 | 208 | 261 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G306300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007223224.2 | 0.0 | myb family transcription factor EFM | ||||
Swissprot | Q9FPE8 | 1e-107 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A251R5K5 | 0.0 | A0A251R5K5_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24423 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF3918 | 33 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-90 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G306300.1.p |
Entrez Gene | 18791957 |
Publications ? help Back to Top | |||
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