PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G238200.4.p | ||||||||
Common Name | PRUPE_ppa002679mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | G2-like | ||||||||
Protein Properties | Length: 403aa MW: 44349.1 Da PI: 5.7164 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.7 | 2.2e-12 | 11 | 38 | 28 | 55 |
G2-like 28 tPktilelmkvkgLtlehvkSHLQkYRl 55 Pk+il+lm+v+ Lt+e+v+SHLQkYRl Prupe.1G238200.4.p 11 GPKKILDLMNVPWLTRENVASHLQKYRL 38 5**************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 1.7E-10 | 10 | 38 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 2.3E-13 | 10 | 43 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.42E-6 | 11 | 42 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009735 | Biological Process | response to cytokinin | ||||
GO:0010082 | Biological Process | regulation of root meristem growth | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 403 aa Download sequence Send to blast |
MMCNVCLAEV GPKKILDLMN VPWLTRENVA SHLQKYRLYL SRLQKENDIK SSFGGTKHSD 60 YSSKDLQGIL SVQNSINIQQ NDVAHGSYRF SGNNLVAQNA DPKSNEGDIK GIVSEPVAEP 120 KKGTTGNIPD SQKTRSSQMD FNSSYAETQK GLVGNVPDSQ KIRSSQMRVN HSFASVESEV 180 NLTAFDSTIP ATYSWNKIQL EKEHKPLIQL NNGFSKPQLP GPQHHFQADQ LQSIPSISSR 240 PSIPGGDVTG SSKSKPSYSE YTNHHGSHVS PTISPTISAT DSFPGQTKSC VVDHQLSETI 300 STSTSNMKNQ GINLSTDLES AQRNLILGST SPFASLDDEF QICWYQGDCY GMNLELQNVE 360 FSEYTDPTHV TEVPAHLYDA LRFEYPCDPS EYSVLDQGLF IA* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00010 | PBM | Transfer from AT1G67710 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G238200.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409742.1 | 0.0 | two-component response regulator ARR11 | ||||
TrEMBL | A0A251R2D8 | 0.0 | A0A251R2D8_PRUPE; Uncharacterized protein | ||||
TrEMBL | M5XQH6 | 0.0 | M5XQH6_PRUPE; Two-component response regulator | ||||
STRING | EMJ28155 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 2e-28 | response regulator 11 |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G238200.4.p |
Entrez Gene | 18789818 |