PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G238200.1.p
Common NamePRUPE_ppa002679mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 617aa    MW: 69017.2 Da    PI: 5.997
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G238200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like764.9e-24199252155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  Prupe.1G238200.1.p 199 KARVVWSVDLHQKFVKAVHQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
                         68*******************.9*******************************8 PP
2Response_reg81.43e-27191271109
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 
                         vl+vdD+p+ +++l+++l+k  y ev+++  +++al+ll+ek+  +D+++ D++mp+mdG++ll++   e  +lp+i+++  ge + + + 
  Prupe.1G238200.1.p  19 VLVVDDDPTWLKILEKMLKKCSY-EVTTCGLARDALNLLREKKdgYDIVVSDVNMPDMDGFKLLEHVGLEM-DLPVIMMSVDGETSRVMKG 107
                         89*********************.***************999999**********************6644.8****************** PP

                         HHTTESEEEESS--HHHHHH CS
        Response_reg  90 lkaGakdflsKpfdpeelvk 109
                         ++ Ga d+l Kp+ ++el++
  Prupe.1G238200.1.p 108 VQHGACDYLLKPIRMKELRN 127
                         *****************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0363922.2E-1481587IPR017053Response regulator B-type, plant
SuperFamilySSF521726.4E-3516139IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23005.8E-4416141No hitNo description
SMARTSM004482.5E-3217129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011043.13418133IPR001789Signal transduction response regulator, receiver domain
PfamPF000723.5E-2419128IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.92E-3020133No hitNo description
SuperFamilySSF466894.39E-17197256IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.4E-27197257IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-21199252IPR006447Myb domain, plants
PfamPF002496.6E-8201251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009735Biological Processresponse to cytokinin
GO:0010082Biological Processregulation of root meristem growth
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    Send to blast
MESSFSSPRN DSFPAGLRVL VVDDDPTWLK ILEKMLKKCS YEVTTCGLAR DALNLLREKK  60
DGYDIVVSDV NMPDMDGFKL LEHVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKKIHEI RDIESHESIE GIQLIRNGSD QYDEGYFFSA EDLTSSRKRK  180
DVDNKYDDKD FSDCSSAKKA RVVWSVDLHQ KFVKAVHQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRLQKE NDIKSSFGGT KHSDYSSKDL QGILSVQNSI NIQQNDVAHG  300
SYRFSGNNLV AQNADPKSNE GDIKGIVSEP VAEPKKGTTG NIPDSQKTRS SQMDFNSSYA  360
ETQKGLVGNV PDSQKIRSSQ MRVNHSFASV ESEVNLTAFD STIPATYSWN KIQLEKEHKP  420
LIQLNNGFSK PQLPGPQHHF QADQLQSIPS ISSRPSIPGG DVTGSSKSKP SYSEYTNHHG  480
SHVSPTISPT ISATDSFPGQ TKSCVVDHQL SETISTSTSN MKNQGINLST DLESAQRNLI  540
LGSTSPFASL DDEFQICWYQ GDCYGMNLEL QNVEFSEYTD PTHVTEVPAH LYDALRFEYP  600
CDPSEYSVLD QGLFIA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-17195257163ARR10-B
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00010PBMTransfer from AT1G67710Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G238200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409742.10.0two-component response regulator ARR11
TrEMBLA0A251R2A30.0A0A251R2A3_PRUPE; Two-component response regulator
STRINGXP_008221977.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39993360
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-137response regulator 11