PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G224000.2.p | ||||||||
Common Name | PRUPE_ppa000516mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | CAMTA | ||||||||
Protein Properties | Length: 950aa MW: 105522 Da PI: 5.7256 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 102 | 4.3e-32 | 12 | 88 | 2 | 77 |
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77 l+e ++rwlk+ e++ iL+n+ek++l++e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LK ++ Prupe.1G224000.2.p 12 LQEaQTRWLKPAEVLYILQNHEKFKLASEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKGKS 88 55669*********************************************************************876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 45.218 | 8 | 142 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 6.9E-31 | 11 | 132 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 1.4E-25 | 14 | 87 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF01833 | 7.5E-8 | 389 | 470 | IPR002909 | IPT domain |
SuperFamily | SSF81296 | 4.34E-19 | 389 | 473 | IPR014756 | Immunoglobulin E-set |
Gene3D | G3DSA:2.60.40.10 | 9.9E-7 | 389 | 471 | IPR013783 | Immunoglobulin-like fold |
CDD | cd00102 | 7.26E-4 | 389 | 473 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 5.9E-17 | 581 | 678 | IPR020683 | Ankyrin repeat-containing domain |
SuperFamily | SSF48403 | 1.13E-17 | 583 | 677 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 16.865 | 583 | 675 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 2.08E-15 | 588 | 675 | No hit | No description |
Pfam | PF12796 | 6.1E-9 | 591 | 676 | IPR020683 | Ankyrin repeat-containing domain |
SMART | SM00248 | 7.5E-4 | 616 | 645 | IPR002110 | Ankyrin repeat |
PROSITE profile | PS50088 | 11.461 | 616 | 648 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 1800 | 655 | 684 | IPR002110 | Ankyrin repeat |
SMART | SM00015 | 13 | 733 | 755 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 7.199 | 734 | 763 | IPR000048 | IQ motif, EF-hand binding site |
SuperFamily | SSF52540 | 2.34E-7 | 777 | 840 | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
SMART | SM00015 | 3.5 | 788 | 810 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.078 | 789 | 818 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 0.0084 | 791 | 809 | IPR000048 | IQ motif, EF-hand binding site |
SMART | SM00015 | 1.8E-4 | 811 | 833 | IPR000048 | IQ motif, EF-hand binding site |
PROSITE profile | PS50096 | 8.993 | 812 | 836 | IPR000048 | IQ motif, EF-hand binding site |
Pfam | PF00612 | 2.9E-5 | 814 | 833 | IPR000048 | IQ motif, EF-hand binding site |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 950 aa Download sequence Send to blast |
MMQSGYNIND LLQEAQTRWL KPAEVLYILQ NHEKFKLASE PPQQPSSGSL FLFNKRVLRF 60 FRRDGHHWRK KKDGRTVGEA HERLKGKSST GSFAQSPVSS SSFSHSPSSK TTQNRGSVSM 120 ISDLREPYQN LSSPGSVEVN SDAAIKKNGR ENPDKLYGTG ESDSSAKFDV GQALRRLEEQ 180 LSLNEDSFNE FVDDNPNSDI MDRFNEFLDD TNGSDILEDH SDMTNQDQFT AFHGPEYVVH 240 DQFYGGRVQM QNNTNNSGEH SQFIGQEFAD RNKDSAPWKE VLDSCKPSSV VEPKEKCLYG 300 LDTNEKLPSS FTSGPTEGQE HCQWLNSDGT NVKNFSLSLP EEVDSFKLSP YSSAMGTHSD 360 YYTSLFEQGQ TGTLDSDISL TVAQKQKFTI REISPEWGYA TEATKVIIVG SFLCDPSDSA 420 WSCMFGDIEV PAQIIQDGVL CCEAPPHLFG KVTICITSSN RVSCSEVREF EYRVKGSSGT 480 NNSPPTETTK SAEELLLLVR FVQMLMSDSS MQNRDSVEPE TLRRLKADDD SWDSIIEALL 540 LGSGSASSNI YWLLEELLKD KLQQWLSSRS HGLDQTGCSL SKKEQGIIHM VAGLGFEWAL 600 NSILSCGVNI NFRDINGWTA LHWAARFGRE KMVAVLIASG ASAGAVTDPN SQDPIGKTPA 660 SIAASSGHKG LAGYLSEVSL TSHLSSLTLE ESELSKGSAE VEAEITVNSI SNRSLQGNED 720 QASLKNTLAA VRNAAQAAAR IQSAFRAHSF RKRQHKEAGV SVDDYGISSD DIQGLSAMSK 780 LAFRNPRDYN SAAVSIQKKY RGWKGRKDFL ALRQKVVKIQ AHVRGYQVRK HYKVICWAVG 840 ILDKIVLRWR RKGVGLRGFR HETQSSEESE DEDILKVFRK QKVDGAIDEA VSRVLSMVES 900 PEARQQYHRM LERYHQAKAE LGGTSGEADV PNSLDDTFNI EDIDMYQFP* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and siliques. {ECO:0000269|PubMed:12218065}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G224000.2.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409564.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
Refseq | XP_020409565.1 | 0.0 | calmodulin-binding transcription activator 4 isoform X1 | ||||
Swissprot | Q9FYG2 | 0.0 | CMTA4_ARATH; Calmodulin-binding transcription activator 4 | ||||
TrEMBL | A0A251R1K0 | 0.0 | A0A251R1K0_PRUPE; Uncharacterized protein | ||||
STRING | EMJ26619 | 0.0 | (Prunus persica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 0.0 | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G224000.2.p |
Entrez Gene | 18791273 |
Publications ? help Back to Top | |||
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