PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G224000.1.p
Common NamePRUPE_ppa000516mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 995aa    MW: 110905 Da    PI: 5.7034
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G224000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.43.8e-55121272116
                CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 
                         l+e ++rwlk+ e++ iL+n+ek++l++e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LKvg+ e+l+cyYah+e+n
  Prupe.1G224000.1.p  12 LQEaQTRWLKPAEVLYILQNHEKFKLASEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKVGNAETLNCYYAHGENN 102
                         55669************************************************************************************** PP

                CG-1  92 ptfqrrcywlLeeelekivlvhyle 116
                         p+fqrr+yw+L+ ++e+ivlvhy+e
  Prupe.1G224000.1.p 103 PNFQRRSYWMLDPAYEHIVLVHYRE 127
                         ***********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143781.0748134IPR005559CG-1 DNA-binding domain
SMARTSM010764.5E-7611129IPR005559CG-1 DNA-binding domain
PfamPF038594.0E-4814127IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.1E-6432519IPR013783Immunoglobulin-like fold
PfamPF018338.0E-8434515IPR002909IPT domain
SuperFamilySSF812964.62E-19434518IPR014756Immunoglobulin E-set
CDDcd001027.65E-4434518No hitNo description
Gene3DG3DSA:1.25.40.205.0E-17626723IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.865628720IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.2E-17628722IPR020683Ankyrin repeat-containing domain
CDDcd002042.23E-15633720No hitNo description
PfamPF127966.5E-9636721IPR020683Ankyrin repeat-containing domain
SMARTSM002487.5E-4661690IPR002110Ankyrin repeat
PROSITE profilePS5008811.461661693IPR002110Ankyrin repeat
SMARTSM002481800700729IPR002110Ankyrin repeat
SMARTSM0001513778800IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.199779808IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.55E-7823885IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.5833855IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.078834863IPR000048IQ motif, EF-hand binding site
PfamPF006120.0089836854IPR000048IQ motif, EF-hand binding site
SMARTSM000151.8E-4856878IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.993857881IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5859878IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 995 aa     Download sequence    Send to blast
MMQSGYNIND LLQEAQTRWL KPAEVLYILQ NHEKFKLASE PPQQPSSGSL FLFNKRVLRF  60
FRRDGHHWRK KKDGRTVGEA HERLKVGNAE TLNCYYAHGE NNPNFQRRSY WMLDPAYEHI  120
VLVHYREISE GKSSTGSFAQ SPVSSSSFSH SPSSKTTQNR GSVSMISDLR EPYQNLSSPG  180
SVEVNSDAAI KKNGRENPDK LYGTGESDSS AKFDVGQALR RLEEQLSLNE DSFNEFVDDN  240
PNSDIMDRFN EFLDDTNGSD ILEDHSDMTN QDQFTAFHGP EYVVHDQFYG GRVQMQNNTN  300
NSGEHSQFIG QEFADRNKDS APWKEVLDSC KPSSVVEPKE KCLYGLDTNE KLPSSFTSGP  360
TEGQEHCQWL NSDGTNVKNF SLSLPEEVDS FKLSPYSSAM GTHSDYYTSL FEQGQTGTLD  420
SDISLTVAQK QKFTIREISP EWGYATEATK VIIVGSFLCD PSDSAWSCMF GDIEVPAQII  480
QDGVLCCEAP PHLFGKVTIC ITSSNRVSCS EVREFEYRVK GSSGTNNSPP TETTKSAEEL  540
LLLVRFVQML MSDSSMQNRD SVEPETLRRL KADDDSWDSI IEALLLGSGS ASSNIYWLLE  600
ELLKDKLQQW LSSRSHGLDQ TGCSLSKKEQ GIIHMVAGLG FEWALNSILS CGVNINFRDI  660
NGWTALHWAA RFGREKMVAV LIASGASAGA VTDPNSQDPI GKTPASIAAS SGHKGLAGYL  720
SEVSLTSHLS SLTLEESELS KGSAEVEAEI TVNSISNRSL QGNEDQASLK NTLAAVRNAA  780
QAAARIQSAF RAHSFRKRQH KEAGVSVDDY GISSDDIQGL SAMSKLAFRN PRDYNSAAVS  840
IQKKYRGWKG RKDFLALRQK VVKIQAHVRG YQVRKHYKVI CWAVGILDKI VLRWRRKGVG  900
LRGFRHETQS SEESEDEDIL KVFRKQKVDG AIDEAVSRVL SMVESPEARQ QYHRMLERYH  960
QAKAELGGTS GEADVPNSLD DTFNIEDIDM YQFP*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and siliques. {ECO:0000269|PubMed:12218065}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G224000.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409564.10.0calmodulin-binding transcription activator 4 isoform X1
RefseqXP_020409565.10.0calmodulin-binding transcription activator 4 isoform X1
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A251R1J90.0A0A251R1J9_PRUPE; Uncharacterized protein
STRINGEMJ266190.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]