PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G208500.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 218aa MW: 24345.8 Da PI: 4.932 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.3 | 1.7e-13 | 136 | 196 | 1 | 61 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 +ke +r +r+ +NR++A+ R+RKk ++ eLe ++keLe N++L +++++l +e a l++ Prupe.1G208500.1.p 136 DKEYRRLKRLLRNRVSAQQARERKKVYVNELESRAKELEDSNSKLEEKISTLVNENAMLRK 196 58999**************************************************998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.5E-12 | 136 | 200 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.4E-13 | 137 | 196 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.093 | 138 | 201 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.13E-13 | 139 | 199 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.4E-17 | 140 | 200 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 143 | 158 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14704 | 8.34E-15 | 150 | 192 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010224 | Biological Process | response to UV-B | ||||
GO:0080167 | Biological Process | response to karrikin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MSVPIKPGDG KAKNPIMPSS LDQQPSGSSS LRPHSLVHQN NKKSKLDVPW FWSLDDDDDD 60 DDDDGDDGDD VNVPEESDED MFTVPDVEAL PPPFNNITSN NTSSTTNATS NTTNNNNPEA 120 QSGFPAKRRR GRNPVDKEYR RLKRLLRNRV SAQQARERKK VYVNELESRA KELEDSNSKL 180 EEKISTLVNE NAMLRKVLMN TRPKVDESIE PKAGSVK* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that promotes photomorphogenesis in light. Acts downstream of the light receptor network and directly affects transcription of light-induced genes. Specifically involved in the blue light specific pathway, suggesting that it participates in transmission of cryptochromes (CRY1 and CRY2) signals to downstream responses. In darkness, its degradation prevents the activation of light-induced genes. {ECO:0000269|PubMed:12023303}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G208500.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020409867.1 | 1e-156 | transcription factor HY5-like isoform X1 | ||||
Swissprot | Q8W191 | 3e-45 | HYH_ARATH; Transcription factor HY5-like | ||||
TrEMBL | A0A251R0S2 | 1e-155 | A0A251R0S2_PRUPE; Uncharacterized protein | ||||
STRING | XP_008222315.1 | 1e-112 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12640 | 26 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17609.2 | 2e-45 | HY5-homolog |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G208500.1.p |