PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Prupe.1G197700.1.p | ||||||||
Common Name | PRUPE_ppa005999mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | bZIP | ||||||||
Protein Properties | Length: 434aa MW: 47289.4 Da PI: 6.5135 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.1 | 2.5e-10 | 231 | 289 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e+ Prupe.1G197700.1.p 231 KRAKRIWANRQSAARSKERKMRYIAELEQKVQTLQTEATSLSAQLTLLQRDTNGLTAEN 289 9*********************************************9998888777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.5E-16 | 227 | 291 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.932 | 229 | 292 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.4E-9 | 231 | 285 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.56E-11 | 231 | 282 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.1E-10 | 231 | 285 | No hit | No description |
CDD | cd14703 | 3.23E-25 | 232 | 281 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 434 aa Download sequence Send to blast |
MDKDKSPAHG GGLPPPSGRY SGFLPTGTPF NVKPEPASSS LFPPLASGAS ADSGHFGHGM 60 SAESSHFSHD ISRMPDNPPR KLGHRRAHSE ILTLPDDISF DSDLGVVGGA DGPSFSDETE 120 EDLFSMYLDM EKFNSSSATS SFQFGEPSSS AAAPVPALTP ALRAPTSSAE NIAIGSNERP 180 RVRHQHSQSM DGSTSIKPEM LVSSSEDISA ADSKKALSAA KLAELALIDP KRAKRIWANR 240 QSAARSKERK MRYIAELEQK VQTLQTEATS LSAQLTLLQR DTNGLTAENS ELKLRLQTME 300 QQVHLQDALN DALKEEIQHL KVLTGQAMPN GGPMMNFASF GSGQQFYPNN QAMHTLLTAQ 360 QFQQLQIHSQ KQQHQFQQHQ LHQLQQQQMQ QQQQQQQQQQ QPQSGDLKMG GSIPSPSQKD 420 NTSEVNQSVT KDC* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppe.1793 | 0.0 | fruit |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Prupe.1G197700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007222380.1 | 0.0 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-159 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | M5XCD0 | 0.0 | M5XCD0_PRUPE; Uncharacterized protein | ||||
STRING | EMJ23579 | 0.0 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5517 | 32 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-143 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Prupe.1G197700.1.p |
Entrez Gene | 18788867 |
Publications ? help Back to Top | |||
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