PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G195600.2.p

Common Name

PRUPE_ppa023771mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 219aa MW: 25392.6 Da PI: 6.0469

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G195600.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84	2.5e-26	67	157	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ +++ +++ +r+ tr gCka++++ +++g+w vtk+ eHnH+l+ Prupe.1G195600.2.p 67 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKLM 157 6***************************************9998822333349********************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.1E-24	67	157	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
MEGGDGGRQF LDSDGGSDDE TFESFHEHNY SVEDDMPLQH CNFVNDGLIS MEPSTGMSFQ 60 SLDDARDFYY EYAKRTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK HTLRKDRVLP 120 PRPITREGCK AMIRLAARDE GRWIVTKFIR EHNHKLMAHC KFPGELPIIN ILSEVEKDKK 180 IQDLYDELQR ERERSAAFQQ QLCMILKDLE EHAEYISE*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G195600.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007224517.2	1e-164	protein FAR1-RELATED SEQUENCE 5 isoform X2
TrEMBL	A0A251QZX9	1e-162	A0A251QZX9_PRUPE; Uncharacterized protein
STRING	EMJ25716	1e-163	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	5e-38	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G195600.2.p
Entrez Gene	18792322