PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G195600.10.p

Common Name

PRUPE_ppa023771mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 178aa MW: 20344 Da PI: 6.9477

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G195600.10.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.7	1.5e-26	67	157	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 +fY eYAk++GF++r+++ ++s +n i+ r+fvCs+eg+r+ +++ +++ +r+ tr gCka++++ +++g+w vtk+ eHnH+l Prupe.1G195600.10.p 67 DFYYEYAKRTGFTIRTNRIRHSLKNMAIIGRDFVCSREGFRAAKHTLrKDRVLPPRPITREGCKAMIRLAARDEGRWIVTKFIREHNHKL 156 6***************************************9998822333349********************************9 PP FAR1 90 a 90 + Prupe.1G195600.10.p 157 M 157 6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.5E-24	67	157	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence Send to blast
MEGGDGGRQF LDSDGGSDDE TFESFHEHNY SVEDDMPLQH CNFVNDGLIS MEPSTGMSFQ 60 SLDDARDFYY EYAKRTGFTI RTNRIRHSLK NMAIIGRDFV CSREGFRAAK HTLRKDRVLP 120 PRPITREGCK AMIRLAARDE GRWIVTKFIR EHNHKLMAHC KFPGELPIIN ILSEGFV*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G195600.10.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020411698.1	1e-130	protein FAR1-RELATED SEQUENCE 5 isoform X1
TrEMBL	A0A251QZX1	1e-130	A0A251QZX1_PRUPE; Uncharacterized protein
STRING	EMJ25716	1e-129	(Prunus persica)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-28	FAR1 family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G195600.10.p
Entrez Gene	18792322