PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G122800.7.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 643aa    MW: 72194.7 Da    PI: 6.2572
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G122800.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1166.44.5e-52261423118
                CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                         +e k+rwl+++ei+aiL n++ +++  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ p
  Prupe.1G122800.7.p  26 EEaKSRWLRPNEIHAILYNYKYFTIYVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSP 116
                         4559*************************************************************************************** PP

                CG-1  93 tfqrrcywlLeeelekivlvhylevk 118
                         tf rrcywlL+++le+ivlvhy+e++
  Prupe.1G122800.7.p 117 TFVRRCYWLLDKSLEHIVLVHYRETQ 142
                         ***********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143777.09121147IPR005559CG-1 DNA-binding domain
SMARTSM010765.7E-7724142IPR005559CG-1 DNA-binding domain
PfamPF038594.0E-4627140IPR005559CG-1 DNA-binding domain
SuperFamilySSF812968.4E-14364451IPR014756Immunoglobulin E-set
SuperFamilySSF484031.23E-7547612IPR020683Ankyrin repeat-containing domain
CDDcd002041.71E-4548613No hitNo description
Gene3DG3DSA:1.25.40.202.4E-6549612IPR020683Ankyrin repeat-containing domain
PROSITE profilePS502978.959566613IPR020683Ankyrin repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    Send to blast
MEKQLGGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQEGSPVTPV NSNNSSSVSD PSAPWLLSEE LDSGANTTFC  180
AGENELSEPG DGLTVKNHEK RLHDINTLEW EELLITNDSK GDIVSCYDQQ NQVVGNGFIS  240
GGASVISAEM SAFGNLTNPT LRSDDVQFNL PDSPYVPTVE YDVNSNVQIR DSIAKTTCDS  300
LDVLVNDGLH SQDSFGRWIN QVMADPPGSV EDPALESSSI AAQNSFASPS ADHLQSSIPH  360
QIFNITDLSP AWAFSNEKTK ILITGFFHQE YLHLAKSDLL CICGDVCLRA EIVQAGVYRC  420
FVPPHLPRVV NLFMSIDGHK PISLVLNFEY RAPVLSDPII SSEENNWEEF QAQMRLAYLL  480
FSSSKSLNIV SNKVSLNALK EAKKFSHRTS HISNSWACLM KAVEDKKSPL PLAKDGLFEL  540
ILKNRLKDWL LEKVVDSSTT KEYDAYGQGV IHLCAILEYT WAVRLFSWSG LSLDFRDRRG  600
WTALHWAAYC GRLLFGDSKC GGSTVKFFGQ LECLRKLFCG GV*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves, pollen, top of sepals and siliques. {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:14581622}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G122800.7.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409880.10.0calmodulin-binding transcription activator 5 isoform X2
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLA0A251QW810.0A0A251QW81_PRUPE; Uncharacterized protein
STRINGXP_008223308.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Ye J, et al.
    Arabidopsis formin3 directs the formation of actin cables and polarized growth in pollen tubes.
    Plant Cell, 2009. 21(12): p. 3868-84
    [PMID:20023198]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  3. Lan Y,Liu X,Fu Y,Huang S
    Arabidopsis class I formins control membrane-originated actin polymerization at pollen tube tips.
    PLoS Genet., 2018. 14(11): p. e1007789
    [PMID:30418966]