PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G122800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 915aa    MW: 103201 Da    PI: 7.084
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G122800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1165.77.7e-52261423118
                CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                         +e k+rwl+++ei+aiL n++ +++  ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+e+ p
  Prupe.1G122800.1.p  26 EEaKSRWLRPNEIHAILYNYKYFTIYVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEDSP 116
                         4559*************************************************************************************** PP

                CG-1  93 tfqrrcywlLeeelekivlvhylevk 118
                         tf rrcywlL+++le+ivlvhy+e++
  Prupe.1G122800.1.p 117 TFVRRCYWLLDKSLEHIVLVHYRETQ 142
                         ***********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.88821147IPR005559CG-1 DNA-binding domain
SMARTSM010765.7E-7724142IPR005559CG-1 DNA-binding domain
PfamPF038596.8E-4627140IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.35E-13366453IPR014756Immunoglobulin E-set
CDDcd002046.95E-14526660No hitNo description
Gene3DG3DSA:1.25.40.208.4E-17550663IPR020683Ankyrin repeat-containing domain
PfamPF127965.3E-7551630IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.82E-17563663IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.777568672IPR020683Ankyrin repeat-containing domain
SMARTSM002489.2E-6601630IPR002110Ankyrin repeat
PROSITE profilePS5008811.621601633IPR002110Ankyrin repeat
SMARTSM002481500640670IPR002110Ankyrin repeat
PROSITE profilePS500967.73749775IPR000048IQ motif, EF-hand binding site
SMARTSM0001526764786IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.053765794IPR000048IQ motif, EF-hand binding site
SMARTSM000150.022787809IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.164788812IPR000048IQ motif, EF-hand binding site
PfamPF006128.2E-4789809IPR000048IQ motif, EF-hand binding site
SMARTSM0001546867889IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.199868897IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 915 aa     Download sequence    Send to blast
MEKQLGGSEI HGFHTMQDLD VGTIMEEAKS RWLRPNEIHA ILYNYKYFTI YVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGEDSPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQELQGSPVT PVNSNNSSSV SDPSAPWLLS EELDSGANTT  180
FCAGENELSE PGDGLTVKNH EKRLHDINTL EWEELLITND SKGDIVSCYD QQNQVVGNGF  240
ISGGASVISA EMSAFGNLTN PTLRSDDVQF NLPDSPYVPT VEYDVNSNVQ IRDSIAKTTC  300
DSLDVLVNDG LHSQDSFGRW INQVMADPPG SVEDPALESS SIAAQNSFAS PSADHLQSSI  360
PHQIFNITDL SPAWAFSNEK TKILITGFFH QEYLHLAKSD LLCICGDVCL RAEIVQAGVY  420
RCFVPPHLPR VVNLFMSIDG HKPISLVLNF EYRAPVLSDP IISSEENNWE EFQAQMRLAY  480
LLFSSSKSLN IVSNKVSLNA LKEAKKFSHR TSHISNSWAC LMKAVEDKKS PLPLAKDGLF  540
ELILKNRLKD WLLEKVVDSS TTKEYDAYGQ GVIHLCAILE YTWAVRLFSW SGLSLDFRDR  600
RGWTALHWAA YCGREKMVAV LLSAGAKPNL VTDPSSENPG GYTAADLAAM KGYDGLAAYL  660
SEKALVEQFK DMSIAGNASG SLQTSSNYGG NSENLSEDEI HLKDTLAAYR TAADAAARIQ  720
AAFRENSLKL KAKAVQYSTP EAEARGIIAA LKIQHAFRNY DTRKKIKAAA RIQYRFRTWK  780
MRQEFLSLRR QAIKIQAAFR GFQVRRQYRK VLWSVGVLEK AVLRWRLKRR GLRGLNVAPV  840
EVDVDQKQES DTEEDFYRAS RKQAEERIER SVVRVQAMFR SKKAQEEYSR MKLTHIEAKL  900
EFEELLDPDS NMDS*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves, pollen, top of sepals and siliques. {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:14581622}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator (PubMed:14581622). Binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved in response to cold. Contributes together with CAMTA3 to the positive regulation of the cold-induced expression of DREB1A/CBF3, DREB1B/CBF1 and DREB1C/CBF2 (PubMed:28351986). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:14581622, ECO:0000269|PubMed:28351986, ECO:0000305|PubMed:11925432}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00435DAPTransfer from AT4G16150Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G122800.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, wounding, abscisic acid, H(2)O(2) and salicylic acid. {ECO:0000269|PubMed:12218065}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409879.10.0calmodulin-binding transcription activator 5 isoform X1
SwissprotO234630.0CMTA5_ARATH; Calmodulin-binding transcription activator 5
TrEMBLA0A251QWG40.0A0A251QWG4_PRUPE; Uncharacterized protein
STRINGXP_008223308.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42883459
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16150.10.0calmodulin binding;transcription regulators
Publications ? help Back to Top
  1. Ye J, et al.
    Arabidopsis formin3 directs the formation of actin cables and polarized growth in pollen tubes.
    Plant Cell, 2009. 21(12): p. 3868-84
    [PMID:20023198]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]
  3. Lan Y,Liu X,Fu Y,Huang S
    Arabidopsis class I formins control membrane-originated actin polymerization at pollen tube tips.
    PLoS Genet., 2018. 14(11): p. e1007789
    [PMID:30418966]