PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G108700.5.p
Common NamePRUPE_ppa000912mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 1013aa    MW: 113282 Da    PI: 7.0615
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G108700.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.33.9e-55201353117
                CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                         +e k+rwl++ ei++iL nf+++elt++++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n+
  Prupe.1G108700.5.p  20 QEaKERWLRPAEICEILRNFQNFELTADPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNS 110
                         5559*************************************************************************************** PP

                CG-1  93 tfqrrcywlLeeelekivlvhylev 117
                         +fqrr+yw+L+++l++ivlvhy++v
  Prupe.1G108700.5.p 111 NFQRRSYWMLDMHLQHIVLVHYRNV 135
                         ***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.60515141IPR005559CG-1 DNA-binding domain
SMARTSM010764.5E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038592.6E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.4E-7443532IPR013783Immunoglobulin-like fold
CDDcd001021.71E-5444532No hitNo description
PfamPF018331.1E-6445530IPR002909IPT domain
SuperFamilySSF812961.26E-18445531IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.9E-15627740IPR020683Ankyrin repeat-containing domain
CDDcd002043.14E-13627736No hitNo description
SuperFamilySSF484033.8E-15628739IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122631738IPR020683Ankyrin repeat-containing domain
SMARTSM002480.066677706IPR002110Ankyrin repeat
PROSITE profilePS500889.538677709IPR002110Ankyrin repeat
SMARTSM00248540716745IPR002110Ankyrin repeat
SuperFamilySSF525403.19E-8784897IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.67846868IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.114847876IPR000048IQ motif, EF-hand binding site
PfamPF006120.01849867IPR000048IQ motif, EF-hand binding site
SMARTSM000151.4E-4869891IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.615870894IPR000048IQ motif, EF-hand binding site
PfamPF006123.3E-5872891IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1013 aa     Download sequence    Send to blast
MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML  120
DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA  180
SSPNRVDWNG KTLSTEFEDV DSGGDAGTSS VAQSMFGSVL HNASLHSQVG GFPESFRDPL  240
SSWYDGPKFA HGAGSSVWNG MDSSTRNERS MHDQNLFVEA PNRADFITHK LPDARLDVDC  300
RVNNVTCKDK LTTDIDVQVA TASSQREPQV SKEHDFNVFH PQVQDFSDPQ VVVNSSNQVE  360
ENSRDGGVQN AESVELKKLD SFGRWMDKEI GVDCDDSLMA SDSGNYWSPL DAENGDKEVS  420
SLSHHMHLDI ESLGPSLSQE QLFSIHDFSP DWAYSETETK VLIVGSFLGS KKHTTETKWG  480
CMFGEIEVSA EVLSNNVIRC QTPLHAPGCV PFYVTCRNRL ACSEVREFEY REKPIGIAIN  540
TSKHDELRFQ IRLAKLVSLG SERKWLECTA LDCDKCKLKS SIFSMRNNRE SDWETIDGAS  600
VPCKSDHLTH RDVLIQNLLK DRLCEWLVCK LHEGGKGPHV LDNEGQGVLH LTAALGYEWA  660
MGPIIASGIS PNFRDARGRT GLHWASYFGR EETVIALLRL GAAPGAVEDP TSAFPGGQTA  720
ADLASSRGHK GIAGYLAEAD LTSHLETLTM NENIVNNVAA TIAAEKAIET ADVVVDEQYS  780
LKSSMAAVRK SAHAAALIQE AFRTRSFRQR QLTKSGTDVS EVQSHDLIAR RSLKRVQKFA  840
HYEDYLHVAA ALKIQQNYRG WKGRKDFLKI RDRIVKIQAH VRGHQVRKNY KKVVWSVGIL  900
EKVILRWRRK GAGLRGFRVE KAIEDVSSEV KKNDDYEFLS VGRKQKYAGV EKALSRVRSM  960
ARQPEAREQY MRLLSKFEKL KMADGESPAS NQIESSDERV LDEVLLALTE GQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.207640.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G108700.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007225358.20.0calmodulin-binding transcription activator 3 isoform X1
RefseqXP_020422407.10.0calmodulin-binding transcription activator 3 isoform X1
TrEMBLA0A251QVY80.0A0A251QVY8_PRUPE; Uncharacterized protein
STRINGXP_008223475.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-161signal responsive 1