PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G108700.4.p
Common NamePRUPE_ppa000912mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 973aa    MW: 108582 Da    PI: 7.2044
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G108700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11407e-4489530117
                CG-1  30 lktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117
                         l+t+   gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n++fqrr+yw+L+++l++ivlvhy++v
  Prupe.1G108700.4.p   8 LPTQQLAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNSNFQRRSYWMLDMHLQHIVLVHYRNV 95 
                         6788899*******************************************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010762.7E-44196IPR005559CG-1 DNA-binding domain
PROSITE profilePS5143761.6331101IPR005559CG-1 DNA-binding domain
PfamPF038593.3E-37895IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.3E-7403492IPR013783Immunoglobulin-like fold
CDDcd001021.63E-5404492No hitNo description
SuperFamilySSF812961.19E-18405491IPR014756Immunoglobulin E-set
PfamPF018331.1E-6405490IPR002909IPT domain
SuperFamilySSF484032.19E-15586699IPR020683Ankyrin repeat-containing domain
CDDcd002042.97E-13587696No hitNo description
Gene3DG3DSA:1.25.40.202.7E-15587700IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122591698IPR020683Ankyrin repeat-containing domain
SMARTSM002480.066637666IPR002110Ankyrin repeat
PROSITE profilePS500889.538637669IPR002110Ankyrin repeat
SMARTSM00248540676705IPR002110Ankyrin repeat
SuperFamilySSF525402.66E-8744857IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.67806828IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.114807836IPR000048IQ motif, EF-hand binding site
PfamPF006120.0096809827IPR000048IQ motif, EF-hand binding site
SMARTSM000151.4E-4829851IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.615830854IPR000048IQ motif, EF-hand binding site
PfamPF006123.2E-5832851IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 973 aa     Download sequence    Send to blast
MADTRKYLPT QQLAGSLFLF DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH  60
CYYAHGEDNS NFQRRSYWML DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV  120
SAPFSAQANS PAPTGQTSFA SSPNRVDWNG KTLSTEFEDV DSGGDAGTSS VAQSMFGSVL  180
HNASLHSQVG GFPESFRDPL SSWYDGPKFA HGAGSSVWNG MDSSTRNERS MHDQNLFVEA  240
PNRADFITHK LPDARLDVDC RVNNVTCKDK LTTDIDVQVA TASSQREPQV SKEHDFNVFH  300
PQVQDFSDPQ VVVNSSNQVE ENSRDGGVQN AESVELKKLD SFGRWMDKEI GVDCDDSLMA  360
SDSGNYWSPL DAENGDKEVS SLSHHMHLDI ESLGPSLSQE QLFSIHDFSP DWAYSETETK  420
VLIVGSFLGS KKHTTETKWG CMFGEIEVSA EVLSNNVIRC QTPLHAPGCV PFYVTCRNRL  480
ACSEVREFEY REKPIGIAIN TSKHDELRFQ IRLAKLVSLG SERKWLECTA LDCDKCKLKS  540
SIFSMRNNRE SDWETIDGAS VPCKSDHLTH RDVLIQNLLK DRLCEWLVCK LHEGGKGPHV  600
LDNEGQGVLH LTAALGYEWA MGPIIASGIS PNFRDARGRT GLHWASYFGR EETVIALLRL  660
GAAPGAVEDP TSAFPGGQTA ADLASSRGHK GIAGYLAEAD LTSHLETLTM NENIVNNVAA  720
TIAAEKAIET ADVVVDEQYS LKSSMAAVRK SAHAAALIQE AFRTRSFRQR QLTKSGTDVS  780
EVQSHDLIAR RSLKRVQKFA HYEDYLHVAA ALKIQQNYRG WKGRKDFLKI RDRIVKIQAH  840
VRGHQVRKNY KKVVWSVGIL EKVILRWRRK GAGLRGFRVE KAIEDVSSEV KKNDDYEFLS  900
VGRKQKYAGV EKALSRVRSM ARQPEAREQY MRLLSKFEKL KMADGESPAS NQIESSDERV  960
LDEVLLALTE GQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.207640.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G108700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007225358.20.0calmodulin-binding transcription activator 3 isoform X1
RefseqXP_020422407.10.0calmodulin-binding transcription activator 3 isoform X1
TrEMBLA0A251QVL30.0A0A251QVL3_PRUPE; Uncharacterized protein
STRINGEMJ265570.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-161signal responsive 1