PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G108700.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 1027aa    MW: 114849 Da    PI: 7.013
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G108700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.33.9e-55201353117
                CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenp 92 
                         +e k+rwl++ ei++iL nf+++elt++++ rp+ gsl+L++rk +ryfrkDG+ w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n+
  Prupe.1G108700.1.p  20 QEaKERWLRPAEICEILRNFQNFELTADPPVRPPAGSLFLFDRKALRYFRKDGHRWRKKKDGKTVKEAHEKLKAGSVDVLHCYYAHGEDNS 110
                         5559*************************************************************************************** PP

                CG-1  93 tfqrrcywlLeeelekivlvhylev 117
                         +fqrr+yw+L+++l++ivlvhy++v
  Prupe.1G108700.1.p 111 NFQRRSYWMLDMHLQHIVLVHYRNV 135
                         ***********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.60515141IPR005559CG-1 DNA-binding domain
SMARTSM010764.5E-7718136IPR005559CG-1 DNA-binding domain
PfamPF038592.7E-4921135IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.4E-7457546IPR013783Immunoglobulin-like fold
CDDcd001021.73E-5458546No hitNo description
SuperFamilySSF812961.27E-18459545IPR014756Immunoglobulin E-set
PfamPF018331.1E-6459544IPR002909IPT domain
SuperFamilySSF484032.19E-15637753IPR020683Ankyrin repeat-containing domain
CDDcd002043.20E-13641750No hitNo description
Gene3DG3DSA:1.25.40.202.9E-15641754IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.122645752IPR020683Ankyrin repeat-containing domain
SMARTSM002480.066691720IPR002110Ankyrin repeat
PROSITE profilePS500889.538691723IPR002110Ankyrin repeat
SMARTSM00248540730759IPR002110Ankyrin repeat
SuperFamilySSF525403.45E-8798911IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.67860882IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.114861890IPR000048IQ motif, EF-hand binding site
PfamPF006120.01863881IPR000048IQ motif, EF-hand binding site
SMARTSM000151.4E-4883905IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.615884908IPR000048IQ motif, EF-hand binding site
PfamPF006123.4E-5886905IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1027 aa     Download sequence    Send to blast
MADTRKYLPT QQLDLAQILQ EAKERWLRPA EICEILRNFQ NFELTADPPV RPPAGSLFLF  60
DRKALRYFRK DGHRWRKKKD GKTVKEAHEK LKAGSVDVLH CYYAHGEDNS NFQRRSYWML  120
DMHLQHIVLV HYRNVGEAYQ SGVPCLLADP GSQVASPQSV SAPFSAQANS PAPTGQTSFA  180
SSPNRVDWNG KTLSTEFEDV DSGGDAGTSS VAQSMFGSVL HNASLHSQVG VPLDLLPFHS  240
VSNFGFPESF RDPLSSWYDG PKFAHGAGSS VWNGMDSSTR NERSMHDQNL FVEAPNRADF  300
ITHKLPDARL DVDCRVNNVT CKDKLTTDID VQVATASSQR EPQVSKEHDF NVFHPQVQDF  360
SDPQVVVNSS NQVEENSRDG GVQNAESVEL KKLDSFGRWM DKEIGVDCDD SLMASDSGNY  420
WSPLDAENGD KEVSSLSHHM HLDIESLGPS LSQEQLFSIH DFSPDWAYSE TETKVLIVGS  480
FLGSKKHTTE TKWGCMFGEI EVSAEVLSNN VIRCQTPLHA PGCVPFYVTC RNRLACSEVR  540
EFEYREKPIG IAINTSKHDE LRFQIRLAKL VSLGSERKWL ECTALDCDKC KLKSSIFSMR  600
NNRESDWETI DGASVPCKSD HLTHRDVLIQ NLLKDRLCEW LVCKLHEGGK GPHVLDNEGQ  660
GVLHLTAALG YEWAMGPIIA SGISPNFRDA RGRTGLHWAS YFGREETVIA LLRLGAAPGA  720
VEDPTSAFPG GQTAADLASS RGHKGIAGYL AEADLTSHLE TLTMNENIVN NVAATIAAEK  780
AIETADVVVD EQYSLKSSMA AVRKSAHAAA LIQEAFRTRS FRQRQLTKSG TDVSEVQSHD  840
LIARRSLKRV QKFAHYEDYL HVAAALKIQQ NYRGWKGRKD FLKIRDRIVK IQAHVRGHQV  900
RKNYKKVVWS VGILEKVILR WRRKGAGLRG FRVEKAIEDV SSEVKKNDDY EFLSVGRKQK  960
YAGVEKALSR VRSMARQPEA REQYMRLLSK FEKLKMADGE SPASNQIESS DERVLDEVLL  1020
ALTEGQ*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.207640.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G108700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007225358.20.0calmodulin-binding transcription activator 3 isoform X1
RefseqXP_020422407.10.0calmodulin-binding transcription activator 3 isoform X1
TrEMBLA0A251QWM50.0A0A251QWM5_PRUPE; Uncharacterized protein
STRINGXP_008223475.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF128892526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22300.21e-161signal responsive 1