PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G075500.5.p
Common NamePRUPE_ppa023964mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family HB-other
Protein Properties Length: 529aa    MW: 59830.9 Da    PI: 10.7455
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G075500.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox34.82.7e-113053481053
                         HHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
            Homeobox  10 eqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                         + +e L ++F +n  ps++ +e L+k+lgL+ ++V+ WF+N R+
  Prupe.1G075500.5.p 305 KAVEKLRQAFSENELPSRDVKENLSKELGLDPEKVSKWFKNARY 348
                         67899*************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.1E-13288347IPR009057Homeodomain-like
PROSITE profilePS5007112.6293353IPR001356Homeobox domain
SMARTSM003892.5E-9295357IPR001356Homeobox domain
SuperFamilySSF466897.27E-11296362IPR009057Homeodomain-like
CDDcd000865.08E-8301348No hitNo description
PfamPF000461.0E-8304348IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009733Biological Processresponse to auxin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    Send to blast
MHGLGKKSSL KESGKPRYSN SVAKLISSPK FRKGGKVSHV KKIKPKSKTI IASCLSKKRG  60
ADSTRKGSRN NGTDKKLMSR KGVHKVHDTN SSKKLSSVKL QDEKFSFKDS DKKGENADGE  120
VKLRIKRRRK KKLQKDKVEL DETSRLQRRT RYLLIKIKLE QNLIDAYSGE GWKGQSREKI  180
KPEKELQRAK KQILKCKLGI RDAIHQLYSL SSVGSMADSV IAADGSVYHE HEMFGKDGPL  240
HEQISDDEDW GPVKRKRREK ESDAASTLMT LYESERIPDV TPTEVKNKHP PDTQVRRACF  300
RIPRKAVEKL RQAFSENELP SRDVKENLSK ELGLDPEKVS KWFKNARYLA LKTRKEESAT  360
NLHTVTTGIS KESTNENVTE KAADLMASDS DDFLAETVVH SPRNVKKSFR RKHPKSLSSP  420
LRKNQQKGSS CGSPAKRNKD GMELSDNVSL KKLLKARTKE KKANLIAEGG CRVAELEMER  480
LCKAKGRLEN MRQKLLKFQN AKAKKSNKSL LHEQSVIYVP IAELKDKV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125131KRRRKKK
2127132RRKKKL
3254259RKRREK
Functional Description ? help Back to Top
Source Description
UniProtSpecifically binds to the fungal elicitor-responsive DNA element, 5'-CTAATTGTTTA-3', of the gene PR2 promoter.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G075500.5.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By pathogen infection.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007224523.10.0pathogenesis-related homeodomain protein isoform X1
SwissprotP487854e-39PRH_ARATH; Pathogenesis-related homeodomain protein
TrEMBLA0A251QU010.0A0A251QU01_PRUPE; Uncharacterized protein
STRINGEMJ257220.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.11e-40pathogenesis related homeodomain protein A
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]