PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G001700.1.p
Common NamePRUPE_ppa017280mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 184aa    MW: 20044.5 Da    PI: 8.1973
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G001700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.37e-172070256
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                        +ykGVr +  +g+Wv+eIr p+    +  r++lg+++ +++Aa+a++aa+ +++ge
  Prupe.1G001700.1.p 20 RYKGVRMRA-WGKWVSEIRLPK----SgDRIWLGSYDAPDKAARAHDAAAYCIHGE 70
                        69****998.**********94....35**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541713.66E-192078IPR016177DNA-binding domain
PfamPF008473.9E-102070IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-272078IPR001471AP2/ERF domain
SMARTSM003804.7E-302083IPR001471AP2/ERF domain
PROSITE profilePS5103220.8372077IPR001471AP2/ERF domain
CDDcd000181.20E-172077No hitNo description
PRINTSPR003674.8E-82132IPR001471AP2/ERF domain
PRINTSPR003674.8E-84359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDLGTTPTSK KVRRERTPGR YKGVRMRAWG KWVSEIRLPK SGDRIWLGSY DAPDKAARAH  60
DAAAYCIHGE RAEFNFPKNR RPVLSKGSTV SLSKKDIQTI ATDFSSADVS ESTPVSSTMT  120
TQVPSDKPAS PNLLVSKGMA SAYEVDSGSF APSCTTGEAV ASLENIQLDD FLMLDTDWIA  180
DFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1519771372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G001700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007226845.11e-134ethylene-responsive transcription factor ERF015
SwissprotQ6NLD52e-53ERF15_ARATH; Ethylene-responsive transcription factor ERF015
TrEMBLM5XQ741e-132M5XQ74_PRUPE; Uncharacterized protein
STRINGEMJ280441e-133(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154791011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.12e-45ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]