PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c9_2771V3.1.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 441aa    MW: 48369.5 Da    PI: 6.7175
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c9_2771V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.81.8e-16256310357
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                       +lkr +r+ +NRe+ArrsR+RK+a +  Le  v++L  eN++L ++l+e++ + +
  Pp3c9_2771V3.1.p 256 DLKRVKRMLSNRESARRSRRRKQAHLSDLEMQVAQLRVENTTLMQRLQEITHMHK 310
                       69***********************************************998866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-15254318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.197256306IPR004827Basic-leucine zipper domain
PfamPF001704.1E-15257308IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.4E-12258306No hitNo description
SuperFamilySSF579599.85E-12258307No hitNo description
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
PfamPF124985.3E-7372417IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    Send to blast
MDRISSVDDI LSAYWNESSM TSPVKGSMNR SASEFAFQEF IKENMTATSC FGGRSKSRFY  60
QSQADEGKAL NDQSRDNLMI SAKSESEFTP PMFASTEELR AMNNVVDPVE VDDIVGIEGA  120
LNPLFSRVQN DADKKYSNFP SAALSAGDCG GQDYEDILKQ KLERACAAAA LSRVNGEGAI  180
IGQSVGAICQ KSFAIESSAA SACPSGVQCA PMSAKSPSPK PEVDASTGKV KLTTSGSELS  240
DDDEHDLLNQ SLPGGDLKRV KRMLSNRESA RRSRRRKQAH LSDLEMQVAQ LRVENTTLMQ  300
RLQEITHMHK DASVDNRILK ADVEALRAKV KMAEDMVARQ GQPMSNLIPD PSLSFMTPFN  360
VNDMERPFLQ QMRHSSMLRH DQQQQPASGI RGKMGRAPSM QRVASLEHLT KRIRNGSSCN  420
VPAWGGWDMD RPAMVQEHGI *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270277RRSRRRKQ
2272277SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024384443.10.0basic leucine zipper 63-like isoform X2
TrEMBLA0A2K1K1R60.0A0A2K1K1R6_PHYPA; Uncharacterized protein
STRINGPP1S213_13V6.20.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.29e-33bZIP family protein