PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c4_6860V3.2.p | ||||||||
Common Name | PHYPADRAFT_86193 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | BES1 | ||||||||
Protein Properties | Length: 347aa MW: 36756.7 Da PI: 8.1643 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 124.6 | 1.3e-38 | 20 | 95 | 6 | 81 |
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeaea 81 k ++ E+E++k+RER+RRai++ki+aGLR++G+y+lp raD+n+VlkAL+ eAGwvve+DG+tyr +g+++++++ Pp3c4_6860V3.2.p 20 KLSASEKEKTKLRERQRRAITTKIFAGLRKYGGYNLPPRADINDVLKALASEAGWVVEPDGNTYRsQGFSQPSSS-L 95 56789************************************************************7787777222.2 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-34 | 23 | 186 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0000006 | anatomy | plant protoplast | ||||
PO:0025017 | anatomy | plant spore | ||||
PO:0030003 | anatomy | protonema | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 347 aa Download sequence Send to blast |
MPKEAPSESN SKSGTSSMAK LSASEKEKTK LRERQRRAIT TKIFAGLRKY GGYNLPPRAD 60 INDVLKALAS EAGWVVEPDG NTYRSQGFSQ PSSSLHHSLR QSNPAMNRLQ QLIQPPTTIN 120 AGFNCTLAGL MGDAGELREG NCSTTASPSH HSMGGAAGHH SNSSSMTLMG SGCISNSPFA 180 SPASSEGGAP SQRLSQGNPY FTGLSNGFLP SCGQVLSDCH DGDSSGIKEE YAAAATYFSA 240 DTLDARDFQM QRATLDVAPH LLNCRDFSGR GFLNHTTTSM NNSMFFNTAA AAAAQPAPNR 300 FSSSRAADPH LSSLMMLSAG HPLFLQEQRA SNQNTPLGSP RLQDPH* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-10 | 38 | 85 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-10 | 38 | 85 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-10 | 38 | 85 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-10 | 38 | 85 | 391 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024373853.1 | 0.0 | protein BZR1 homolog 4-like isoform X2 | ||||
TrEMBL | A0A2K1KMG8 | 0.0 | A0A2K1KMG8_PHYPA; Uncharacterized protein | ||||
STRING | PP1S143_29V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 3e-22 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c4_6860V3.2.p |
Entrez Gene | 5935123 |
Publications ? help Back to Top | |||
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