PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c2_9700V3.1.p | ||||||||
Common Name | PHYPADRAFT_165218, WRKY37 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | WRKY | ||||||||
Protein Properties | Length: 533aa MW: 59922.4 Da PI: 6.3594 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 70.5 | 2.4e-22 | 287 | 345 | 2 | 59 |
--SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDg++ W+KYG K +++s+f r+YY+C++++C++kk v+ ++++p+++e+tY g+H+++ Pp3c2_9700V3.1.p 287 DDGHRcWKKYGNKAIQNSTFCRGYYKCSMKECRAKKMVQPTDTNPSIFEVTYLGKHTCS 345 688755***************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.8E-23 | 281 | 346 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-20 | 285 | 346 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.9E-24 | 286 | 346 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-19 | 287 | 344 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 16.122 | 293 | 347 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 533 aa Download sequence Send to blast |
MDAASLRLDV HRNMSPLGIS QWTSPANAVE KVEEMLSKAI NYQKDLWDIL VVQSTESDPT 60 REMRQGDLIP PQLLKSLKSK LENSMDSCNS ALNRLKDIMV QTTSLPSLAS PENLELQKEW 120 NTYVGSFFLN ELSQLSSGPQ TCDDEELHEQ SMSLLVSEVE TQQNQGVSSL PSLELVSDWN 180 MLSEAPVSDL PPSPGVALMD QGRQSPSTCH LHIPEASCND SIASTDVQDL ADNPNDRRLM 240 TKLNSRGLRP RCGPKRDREQ TEERGATMSV VFQELKPGDD MKKGIPDDGH RCWKKYGNKA 300 IQNSTFCRGY YKCSMKECRA KKMVQPTDTN PSIFEVTYLG KHTCSSTSRR RIRSRPTPAH 360 APKPQANITE TRVASQCTST QNPKSQHPPH KTKPSGNDEQ NTTTVQRKNT QLPKPRQTTS 420 TMRSTIGDLR EGANSQREDN NWPSAGQQEA IENEGNMGMD SEGTNCSRED DEDDEQEARF 480 HYQSLRHHHH HPHHHHHPQS GFSFHTDTLL WSEILNSNHR EVWSSGNLQV EI* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.7632 | 0.0 | gametophore| protonema |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369049.1 | 0.0 | uncharacterized protein LOC112279136 isoform X2 | ||||
TrEMBL | A0A2K1L0V3 | 0.0 | A0A2K1L0V3_PHYPA; Uncharacterized protein | ||||
STRING | PP1S84_106V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP14 | 17 | 875 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 7e-17 | WRKY DNA-binding protein 46 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c2_9700V3.1.p |
Entrez Gene | 5929572 |
Publications ? help Back to Top | |||
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