PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c2_26200V3.1.p | ||||||||
Common Name | PHYPADRAFT_84014 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | NZZ/SPL | ||||||||
Protein Properties | Length: 660aa MW: 70756.1 Da PI: 7.242 | ||||||||
Description | NZZ/SPL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NOZZLE | 22.2 | 2.4e-07 | 44 | 87 | 40 | 84 |
NOZZLE 40 kksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvva 84 s gr g k ++ qkkp rg+gva+ler +++e+ k+ +++ Pp3c2_26200V3.1.p 44 VSSEGRSRGRKV-KNAQKKPPQRGLGVAQLERLRLQEQSKQEAAC 87 457889888886.57899*******************99997543 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF08744 | 1.7E-5 | 39 | 87 | IPR014855 | Plant transcription factor NOZZLE |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0025017 | anatomy | plant spore | ||||
PO:0030003 | anatomy | protonema | ||||
PO:0030018 | anatomy | gametophore |
Sequence ? help Back to Top |
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Protein Sequence Length: 660 aa Download sequence Send to blast |
MATLLMRSSE VAAVEKLTMA SREQVRLQQE KVPGHFEQEG PHKVSSEGRS RGRKVKNAQK 60 KPPQRGLGVA QLERLRLQEQ SKQEAACLAS IQVLPSFSFT DHNGGICVLP LKSGTVSHQQ 120 PGLSSALSFN NGRTGPSEKL HYLAEDGHQL GKVAVDGEGF QSIMSFANSD HSTAGTFARH 180 AQGGQSIALI FSRNREIREH SYGCNSMRTV PSLSSLSSLS ERPGSRGLGS CGTSAYAEGS 240 SGKFPPCVQG CHGSPPSSTA KSSLLSNALT TGVNLVDSLA SNAEQGKQRL SEMDRESVYM 300 FQVTSNGVGD AGMVDAKLFP AVGKNGAVSL FTSNNLQCFE SSSGPAKLRR LPQDRAEVPV 360 AGVVTNCGRP KELSSFQSFS SNNTWSASEK ICGQKRPWYD LNENTSKSMH SEGLDLNAPV 420 GKVEAVQSGC YASLSQGHES TAGIHHTAGI TGSGLDNTLP LLKDKACAAL QENEAQNLST 480 TTDVDYHSVE SFLKVSCPTK SKIKDCCSSV CSPCESPITR QRCLSSSEVP MLMEADHETS 540 GDFLTLGIST RSYPISPQLG VEVNSKESMN HEDSHQVKRI KNFQDDALQL QMFNHREESA 600 PSVTDGIHSP CTDTSFFSAV GLSCRFTSTS SSNVSEVCLK LTGREEKRDF LDLNLKLAL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024398461.1 | 0.0 | uncharacterized protein LOC112293375 | ||||
TrEMBL | A0A2K1L320 | 0.0 | A0A2K1L320_PHYPA; Uncharacterized protein | ||||
STRING | PP1S119_4V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10655 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27330.1 | 4e-06 | sporocyteless (SPL) |
Link Out ? help Back to Top | |
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Phytozome | Pp3c2_26200V3.1.p |
Entrez Gene | 5933143 |
Publications ? help Back to Top | |||
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