PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c22_13770V3.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 460aa MW: 49969.8 Da PI: 7.5956 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.6 | 2e-11 | 278 | 336 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe+kv++L++e ++L +l l+k +l++e+ Pp3c22_13770V3.3.p 278 KRAKRILANRQSAARSKERKMRYISELERKVQSLQTEATTLSAQLTLLQKDTTSLTTEN 336 9******************************************************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.6E-17 | 274 | 338 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.243 | 276 | 339 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.26E-11 | 278 | 331 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 7.9E-11 | 278 | 333 | No hit | No description |
Pfam | PF00170 | 3.8E-10 | 278 | 336 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.18E-23 | 279 | 328 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence Send to blast |
MEGLGEDYEA FVERLQSAAG TAAKGSGNSS SSNAASHPPH PTQSPLHQSR YVGYPSTSHP 60 FTVKRETSPA LSESSMRSRE SLEVSMQDAV NSPAPPGFTG SGQPPRIPSP AHNYSTDVNR 120 MPESPPRRRG HRRAQSEIAF RLPDEASFER ELHSSEMPAL SDEVGEDLFS MYIDMDQINN 180 FSNSSGQAGA KSAGEGNNAL PPTSSHHSRS LSMEALGGFN NSRAGLGGNY GSSEAPRRPR 240 HQHSSSLDGS TSLDFEGSDS KKAMASAKLS EIALIDPKRA KRILANRQSA ARSKERKMRY 300 ISELERKVQS LQTEATTLSA QLTLLQKDTT SLTTENSELK LRLQAMEQQA QLRDALHEAL 360 RDEVQRLRVA TGQLSNGSGQ NSSLGGQHVF QMQNQSLNVQ QIQQLQQTAL NNQQQQQQSS 420 QQQMHSEYLQ RSGYSLSSGF MKPEGSSIAI NHGNSSSFG* |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.7907 | 0.0 | gametophore| protonema |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024360862.1 | 0.0 | transcription factor RF2a-like | ||||
Swissprot | Q04088 | 9e-83 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A2K1INE9 | 0.0 | A0A2K1INE9_PHYPA; Uncharacterized protein | ||||
STRING | PP1S512_3V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 3e-71 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pp3c22_13770V3.3.p |
Publications ? help Back to Top | |||
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