PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c20_7290V3.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 262aa MW: 27288.6 Da PI: 11.1355 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.5e-15 | 173 | 217 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k+ Pp3c20_7290V3.4.p 173 RRQRRMIKNRESAARSRARKQAYTVELEAEVSQLKEENMRLRKQQ 217 79****************************************864 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-10 | 169 | 233 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 171 | 216 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.1E-12 | 173 | 221 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 2.83E-22 | 173 | 218 | No hit | No description |
SuperFamily | SSF57959 | 4.69E-11 | 173 | 220 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.7E-14 | 173 | 222 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence Send to blast |
MASRALSPRT QGRGGGAGAG AGAGGGASNG ASASSASNGL AGSSLAGLGS RFNSLARQSS 60 IYSLTLDEFQ NALSEPGKNF GSMNMDEFLK NIWTAEESMG GGMTGGGLAM GLGGAMGGGM 120 TVNMGLAPNS PPSPDSDGGR SGLSLSPMHY GLDGSVRGRK RGPDGPVEKV VERRQRRMIK 180 NRESAARSRA RKQAYTVELE AEVSQLKEEN MRLRKQQVST RKSEEEAERR KKQIMDILKS 240 ATTVGGAKKS STLRRTKTAT W* |
Expression -- Description ? help Back to Top | ||||||
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Source | Description | |||||
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves, flowers and siliques but not in seeds. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313}. |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024357434.1 | 1e-142 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
Swissprot | Q9M7Q4 | 3e-29 | AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A2K1IUE8 | 3e-84 | A0A2K1IUE8_PHYPA; Uncharacterized protein | ||||
TrEMBL | A0A4D6QI95 | 1e-81 | A0A4D6QI95_9BRYO; Abscisic acid-insensitive 5 | ||||
STRING | PP1S49_161V6.1 | 5e-53 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10063 | 7 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36270.1 | 5e-28 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Pp3c20_7290V3.4.p |
Publications ? help Back to Top | |||
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