PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pp3c20_7290V3.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 181aa MW: 19118.9 Da PI: 11.4386 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.6 | 3.5e-15 | 92 | 136 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r+rr++kNRe+A rsR+RK+a++ eLe +v +L++eN++L+k+ Pp3c20_7290V3.3.p 92 RRQRRMIKNRESAARSRARKQAYTVELEAEVSQLKEENMRLRKQQ 136 79****************************************864 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.7E-10 | 88 | 152 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.22 | 90 | 135 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-12 | 92 | 140 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 7.34E-23 | 92 | 137 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.5E-15 | 92 | 140 | No hit | No description |
SuperFamily | SSF57959 | 2.38E-11 | 92 | 139 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 95 | 110 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 181 aa Download sequence Send to blast |
MAGLGWGGAM GANMGPGMGG GMTGGGLAMG LGGAMGGGMT VNMGLAPNSP PSPDSDGGRS 60 GLSLSPMHYG LDGSVRGRKR GPDGPVEKVV ERRQRRMIKN RESAARSRAR KQAYTVELEA 120 EVSQLKEENM RLRKQQVSTR KSEEEAERRK KQIMDILKSA TTVGGAKKSS TLRRTKTATW 180 * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_024357434.1 | 1e-93 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A2K1IUE8 | 3e-84 | A0A2K1IUE8_PHYPA; Uncharacterized protein | ||||
TrEMBL | A0A4D6QI95 | 6e-82 | A0A4D6QI95_9BRYO; Abscisic acid-insensitive 5 | ||||
STRING | PP1S49_161V6.1 | 1e-53 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G36270.1 | 8e-29 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Phytozome | Pp3c20_7290V3.3.p |