PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pp3c1_5800V3.5.p

Organism

Physcomitrella patens

Taxonomic ID

3218

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

bZIP

Protein Properties

Length: 846aa MW: 96642.2 Da PI: 4.4925

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c1_5800V3.5.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.7	9.3e-07	681	716	27	62
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 27 eieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ei+eL+ekv++Le+eN++L +e++ +k+ ak +se Pp3c1_5800V3.5.p 681 EIAELQEKVEALENENERLYNEIDGMKEDLAKAESE 716 899**************************9988776 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence Send to blast
MYQYDPYGYQ AYNNPQPEHY APPGLPQPSR PSTLTDPAYS YSDQYAPYPG YDSQSYGSQL 60 NSFQQNYYPS NSPATPEDYS APYAHSSSLQ HSSSYNYPHS EQQPTSSLSH SAASQYPPAA 120 PPDSSFYPGV SSGPYTTTPG ESTSWTSNFA SLLSKPESVK HDEPHGCHSV PKPDDKKENI 180 SFSVNEAQAI IRNLKETNHD LKLQLSNSRD AINKVASEKD AKIQELQREL DAAKRKISSH 240 VPVGPLEAIA ASEREWTQRQ SLKEQENREL LAQRERDWAV KLSNSDQEIS ALRIKIAKLE 300 SDTDSRRVLL LETNAAQEAE LIKLREVAKH REEELMRQKE EIEKREQELM KLRDETNKLY 360 DEITQMVDEK EAISLSITKL EGEKSDLEEQ LTQLKQSFDE LMAKSNATAD EKKDLLRSNT 420 ALETALEECR MQIETLESEQ LPTLNSQIEL LNTLHEEAED KIAQYENKIT QLENELEDAV 480 NAREIAERKL GDAEQREMET SLRLAGEHRS AIEEIQKLRF QLDSHVSDTS DNEKLESEKR 540 SLEQKLAEVE GEKKKALDRI SDLEESLKAV TARKDELDEE LAIMEETMDR EAQEHETVEK 600 DVKLKIEKLE KEVSILTRDK NDTEKLLHAT EDMLRLLKED ISQKREAGTT ARGGEDLDEE 660 KAMLMAKFAE LEKDNVLMND EIAELQEKVE ALENENERLY NEIDGMKEDL AKAESEAIAK 720 RRMEREIKGL KFDLAKGAAK IENFEVEIQA LNSQIEVLNK ELHDANVKMY DMEDNRSDLE 780 QQFKELLNDK KNAGVKAAQL GEELLKKEME IKEMKDQVRD ISDKFLNVVA ERDDLEQANR 840 LLRNK*

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence Send to blast

MYQYDPYGYQ AYNNPQPEHY APPGLPQPSR PSTLTDPAYS YSDQYAPYPG YDSQSYGSQL  60
NSFQQNYYPS NSPATPEDYS APYAHSSSLQ HSSSYNYPHS EQQPTSSLSH SAASQYPPAA  120
PPDSSFYPGV SSGPYTTTPG ESTSWTSNFA SLLSKPESVK HDEPHGCHSV PKPDDKKENI  180
SFSVNEAQAI IRNLKETNHD LKLQLSNSRD AINKVASEKD AKIQELQREL DAAKRKISSH  240
VPVGPLEAIA ASEREWTQRQ SLKEQENREL LAQRERDWAV KLSNSDQEIS ALRIKIAKLE  300
SDTDSRRVLL LETNAAQEAE LIKLREVAKH REEELMRQKE EIEKREQELM KLRDETNKLY  360
DEITQMVDEK EAISLSITKL EGEKSDLEEQ LTQLKQSFDE LMAKSNATAD EKKDLLRSNT  420
ALETALEECR MQIETLESEQ LPTLNSQIEL LNTLHEEAED KIAQYENKIT QLENELEDAV  480
NAREIAERKL GDAEQREMET SLRLAGEHRS AIEEIQKLRF QLDSHVSDTS DNEKLESEKR  540
SLEQKLAEVE GEKKKALDRI SDLEESLKAV TARKDELDEE LAIMEETMDR EAQEHETVEK  600
DVKLKIEKLE KEVSILTRDK NDTEKLLHAT EDMLRLLKED ISQKREAGTT ARGGEDLDEE  660
KAMLMAKFAE LEKDNVLMND EIAELQEKVE ALENENERLY NEIDGMKEDL AKAESEAIAK  720
RRMEREIKGL KFDLAKGAAK IENFEVEIQA LNSQIEVLNK ELHDANVKMY DMEDNRSDLE  780
QQFKELLNDK KNAGVKAAQL GEELLKKEME IKEMKDQVRD ISDKFLNVVA ERDDLEQANR  840
LLRNK*

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Ppa.5296	0.0	protonema

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024383851.1	0.0	myosin-11-like
Refseq	XP_024383862.1	0.0	myosin-11-like
Refseq	XP_024383870.1	0.0	myosin-11-like
Refseq	XP_024383878.1	0.0	myosin-11-like
Refseq	XP_024383888.1	0.0	myosin-11-like
TrEMBL	A0A2K1L730	0.0	A0A2K1L730_PHYPA; Uncharacterized protein
STRING	PP1S45_229V6.2	0.0	(Physcomitrella patens)

Link Out ? help Back to Top
Phytozome	Pp3c1_5800V3.5.p