PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c18_16260V3.8.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | bZIP | ||||||||
Protein Properties | Length: 425aa MW: 43560.4 Da PI: 6.4153 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 70.8 | 2e-22 | 290 | 352 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+e+kr+rrkq+NRe+ArrsR+RK+ae+eeL ++v++L+ eN aL+ el++ ++e+++l++e+ Pp3c18_16260V3.8.p 290 EREVKRQRRKQSNRESARRSRLRKQAECEELGTRVDALTVENIALRTELSRVTEECKRLQAEN 352 799********************************************************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 7.9E-14 | 29 | 109 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 6.8E-19 | 284 | 349 | No hit | No description |
Pfam | PF00170 | 2.7E-20 | 290 | 352 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.3E-19 | 290 | 354 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.335 | 292 | 355 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.94E-11 | 293 | 348 | No hit | No description |
CDD | cd14702 | 1.29E-21 | 295 | 345 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 297 | 312 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence Send to blast |
MGAAGEMAAA SPAISKASKT SSAPPPPATT TSPIPIASHE PISQAGATGY NEWLAAFQAY 60 YQAGAQPPAG GFPHPYMWGG QPMMPPPYGG PHPSYGAMYP PGGMYGHPMY GQYGAQVAEG 120 MTGIEQGADG KIEAKSGEGA KASTMKRSKG SKGSLQLLKV SGSGGKGKGN GVSQSASNGE 180 EGEHNGETGS DEGGSTDASR EENAQNLLGG KRSFEQMAME AVGGPPYMPP PGSVSGVPPP 240 PVGTPGPGGS LDMSLDYWSA GSLPQTKGGK QASGSPSTSA PPTEMWLTDE REVKRQRRKQ 300 SNRESARRSR LRKQAECEEL GTRVDALTVE NIALRTELSR VTEECKRLQA ENGSLMQKIR 360 STPPSEMGGA HAAAVAGALA SAGGESEAVV SAKEIQELHS NGNGLGFVPK DGKLGGEISE 420 CSFV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 306 | 312 | RRSRLRK |
2 | 306 | 313 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Ppa.14699 | 0.0 | gametophore| sporophyte |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024402784.1 | 0.0 | bZIP transcription factor 68-like | ||||
Refseq | XP_024402785.1 | 0.0 | bZIP transcription factor 68-like | ||||
Refseq | XP_024402786.1 | 0.0 | bZIP transcription factor 68-like | ||||
Refseq | XP_024402787.1 | 0.0 | bZIP transcription factor 68-like | ||||
Refseq | XP_024402788.1 | 0.0 | bZIP transcription factor 68-like | ||||
Refseq | XP_024402789.1 | 0.0 | bZIP transcription factor 68-like | ||||
TrEMBL | A0A2K1J1C5 | 0.0 | A0A2K1J1C5_PHYPA; Uncharacterized protein | ||||
STRING | PP1S3_150V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 2e-25 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c18_16260V3.8.p |