PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c18_16260V3.5.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 428aa    MW: 43849.8 Da    PI: 7.2154
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c18_16260V3.5.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.82.1e-22290352163
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                         e+e+kr+rrkq+NRe+ArrsR+RK+ae+eeL ++v++L+ eN aL+ el++ ++e+++l++e+
  Pp3c18_16260V3.5.p 290 EREVKRQRRKQSNRESARRSRLRKQAECEELGTRVDALTVENIALRTELSRVTEECKRLQAEN 352
                         799********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.0E-1429109IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1706.9E-19284349No hitNo description
PfamPF001702.7E-20290352IPR004827Basic-leucine zipper domain
SMARTSM003381.3E-19290354IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.335292355IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.0E-11293348No hitNo description
CDDcd147023.37E-21295345No hitNo description
PROSITE patternPS000360297312IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MGAAGEMAAA SPAISKASKT SSAPPPPATT TSPIPIASHE PISQAGATGY NEWLAAFQAY  60
YQAGAQPPAG GFPHPYMWGG QPMMPPPYGG PHPSYGAMYP PGGMYGHPMY GQYGAQVAEG  120
MTGIEQGADG KIEAKSGEGA KASTMKRSKG SKGSLQLLKV SGSGGKGKGN GVSQSASNGE  180
EGEHNGETGS DEGGSTDASR EENAQNLLGG KRSFEQMAME AVGGPPYMPP PGSVSGVPPP  240
PVGTPGPGGS LDMSLDYWSA GSLPQTKGGK QASGSPSTSA PPTEMWLTDE REVKRQRRKQ  300
SNRESARRSR LRKQAECEEL GTRVDALTVE NIALRTELSR VTEECKRLQA ENGSLMQKIR  360
STPPSEMGGA HAAAVAGALA SAGGESEAVV SAKEIQELHS NGNGLGFVPK DGKLGGMKVQ  420
EKQAAVA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1306312RRSRLRK
2306313RRSRLRKQ
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.146990.0gametophore| sporophyte
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024402784.10.0bZIP transcription factor 68-like
RefseqXP_024402785.10.0bZIP transcription factor 68-like
RefseqXP_024402786.10.0bZIP transcription factor 68-like
RefseqXP_024402787.10.0bZIP transcription factor 68-like
RefseqXP_024402788.10.0bZIP transcription factor 68-like
RefseqXP_024402789.10.0bZIP transcription factor 68-like
TrEMBLA0A2K1J1C50.0A0A2K1J1C5_PHYPA; Uncharacterized protein
STRINGPP1S3_150V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-25G-box binding factor 3