PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pp3c12_13650V3.1.p | ||||||||
Common Name | PHYPADRAFT_78341 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
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Family | BES1 | ||||||||
Protein Properties | Length: 350aa MW: 37293.3 Da PI: 8.9916 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 128.6 | 7.4e-40 | 20 | 109 | 6 | 97 |
DUF822 6 kptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeaeaagssasaspesslq 95 k ++ E+E++k+RER+RRai++ki+aGLR++G+y+lp raD+n+VlkAL+ eAGwvve+DG+tyr +++k+ + ++ g s+ p+sslq Pp3c12_13650V3.1.p 20 KLSASEKEKTKLRERQRRAITTKIFAGLRKYGGYNLPPRADINDVLKALASEAGWVVEPDGNTYRsQHFKRVHVMSEQGFSQ---PSSSLQ 107 56789************************************************************77888885555555443...333333 PP DUF822 96 ss 97 +s Pp3c12_13650V3.1.p 108 HS 109 22 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 2.9E-34 | 23 | 112 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0030003 | anatomy | protonema |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MPKEVTCESD SKSGTSSMAK LSASEKEKTK LRERQRRAIT TKIFAGLRKY GGYNLPPRAD 60 INDVLKALAS EAGWVVEPDG NTYRSQHFKR VHVMSEQGFS QPSSSLQHSL RQTNPAMNRL 120 NLIPPPTTLN TGFNCTLAGL MADAGELREG NCSTTASPRH HSMGGAAGHH SNSSSMTLIG 180 SGCISNSPFA SPASSEGGPP SQRLSQGNPY LAGLSNGFLP SCGQVLSDGR DGDSSGIKEE 240 SAAAAAAAYF SADTLDARDF QMQRATLDAS HFLNSRDFSG RGSLTNSNNN NMNSLFFNAA 300 QQAPNRFGQR AAPQLPNLMM LSTGHPFLQE QRASNQNTPL GSPRLQDPN* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-10 | 38 | 84 | 391 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-10 | 38 | 84 | 391 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-10 | 38 | 84 | 391 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-10 | 38 | 84 | 391 | 437 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024391346.1 | 0.0 | BES1/BZR1 homolog protein 4-like isoform X1 | ||||
TrEMBL | A0A2K1JQN9 | 0.0 | A0A2K1JQN9_PHYPA; Uncharacterized protein | ||||
TrEMBL | A9SEM0 | 0.0 | A9SEM0_PHYPA; Predicted protein | ||||
STRING | PP1S70_273V6.1 | 0.0 | (Physcomitrella patens) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP10087 | 8 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45880.1 | 7e-22 | beta-amylase 7 |
Link Out ? help Back to Top | |
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Phytozome | Pp3c12_13650V3.1.p |
Entrez Gene | 5927884 |
Publications ? help Back to Top | |||
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