PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pp3c10_13030V3.4.p

Organism

Physcomitrella patens

Taxonomic ID

3218

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

G2-like

Protein Properties

Length: 337aa MW: 36497.5 Da PI: 7.7968

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c10_13030V3.4.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	32.7	1.7e-10	1	23	33	55
G2-like 33 lelmkvkgLtlehvkSHLQkYRl 55 +++m+vkgLtl+h+kSHLQk+Rl Pp3c10_13030V3.4.p 1 MRVMSVKGLTLYHLKSHLQKFRL 23 789*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.0E-8	1	24	IPR009057	Homeodomain-like
Pfam	PF14379	9.8E-20	68	114	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence Send to blast
MRVMSVKGLT LYHLKSHLQK FRLGKHMQRE SHEAIKNAAH GSSHLKGSSS DSKLSPANLP 60 NPQGKYVNVN EALQLQMAAQ IRLQEQLEVQ KQLQQRIEEQ GKYLQSILEK AKETLADHTS 120 TSPVLKLAHE ELTELASKVI DYEIPKPAFE SIKLPGLNPP ELSQKHGSAD TQAVITPAAH 180 NLRQQQQSHC IQSGASSQKS FLSNLPADQD DSGDEHQAVT ERVSNSSSQG AFMVEKGVSG 240 SAFERPPASK TSILADHRDT TTTTTTSAST GGYTWPSAAA CHGTFQAAAQ SRKVTSSACV 300 KSEGSPLDLN GNNNNNTGGL DLNAFGWEQQ QQQQQR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024386854.1	0.0	protein PHR1-LIKE 2-like
Refseq	XP_024386855.1	0.0	protein PHR1-LIKE 2-like
TrEMBL	A0A2K1JYU7	0.0	A0A2K1JYU7_PHYPA; Uncharacterized protein
STRING	PP1S141_97V6.1	0.0	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24120.1	1e-25	G2-like family protein

Link Out ? help Back to Top
Phytozome	Pp3c10_13030V3.4.p