PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652248.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 416aa    MW: 48239.1 Da    PI: 4.5365
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652248.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1392.9e-43161462128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek...ewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                     p GfrFhPt+eelv++yLk+k +++++++ ++i+e+di+k++Pw++p   ++++++   ew+fFs+rd ky +++r+nrat +g Wk tgk++ +
  XP_016652248.1  16 PLGFRFHPTEEELVDYYLKNKRQDRDFNV-NHIPEIDICKYDPWEIPgLLFAEQDSpymEWFFFSRRDYKYMNSNRSNRATPHGSWKITGKERMI 109
                     89***************************.88***************544444444577************************************ PP

             NAM  93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++ +++++g+k+t++fy+    k++kt+Wvmhey+l
  XP_016652248.1 110 RARgSNAVIGTKRTMTFYERGVLKSKKTNWVMHEYNL 146
                     **9666779*********9999999**********87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.18E-4813169IPR003441NAC domain
PROSITE profilePS5100546.13515170IPR003441NAC domain
PfamPF023653.4E-2516146IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MGSKCYRKTT EGDPVPLGFR FHPTEEELVD YYLKNKRQDR DFNVNHIPEI DICKYDPWEI  60
PGLLFAEQDS PYMEWFFFSR RDYKYMNSNR SNRATPHGSW KITGKERMIR ARGSNAVIGT  120
KRTMTFYERG VLKSKKTNWV MHEYNLFESE ASPDPQLAER DFVLYRMKKN PDKKDTSVFA  180
EGEPSSYNWS NCEDQAAHVT PEDHSPSTLQ SPAYIELGDV LQVNGFNGDC NDMQSPFGDN  240
DYSVTHKNDF STFDEVAYDM SQELYAQQDK NSYMLMPQSP TFRNLEDFTY INASDFGNQT  300
ANNMVLEQAQ DYHSFTLPSP IYSELGSVPH DDVYNNEWQS AYANFENQTT DERISEECPQ  360
PKENLRSILS ASQLADYTSQ SLMNTEEYQR RHCEIGIEGA AGMNWEGSFF NFPLKP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-321517017165NO APICAL MERISTEM PROTEIN
1ut4_B7e-321517017165NO APICAL MERISTEM PROTEIN
1ut7_A7e-321517017165NO APICAL MERISTEM PROTEIN
1ut7_B7e-321517017165NO APICAL MERISTEM PROTEIN
4dul_A7e-321517017165NAC domain-containing protein 19
4dul_B7e-321517017165NAC domain-containing protein 19
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652248.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652248.10.0PREDICTED: NAC domain-containing protein 14-like isoform X3
TrEMBLA0A251QJV80.0A0A251QJV8_PRUPE; Uncharacterized protein
STRINGXP_008244181.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.16e-41NAC transcription factor-like 9