PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_016652231.1
Organism
Prunus mume
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 182aa    MW: 21460.4 Da    PI: 9.3291
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_016652231.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.32.3e-265817613128
             NAM  13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvg 101
                     +l +++Lk+ ++gk  +    i+e+d+yk+ePwdL +        + + w+ Fs+ d kya+++r nra  +g+Wk tgk ++v+s+   ++++ 
  XP_016652231.1  58 QLFCRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPDYKYANSRRCNRASGKGFWKITGKPRQVKSRqlPKSVTC 149
                     68899********99666...**************8444553333778**************************************866566677 PP

             NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                      k+tL+f++gr pk+++t Wv +ey l
  XP_016652231.1 150 KKRTLTFHEGRVPKSRNTGWVRQEYYL 176
                     889**********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.15E-5854IPR003441NAC domain
PROSITE profilePS5100528.97711182IPR003441NAC domain
PfamPF023651.0E-1213175IPR003441NAC domain
SuperFamilySSF1019416.28E-2758180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MSTTEESVLD LLPKFRFHPS EEEMVNLLKN KVEGQDSQAM PDEIVDKPWD LPDNESIQLF  60
CRFLKRMMQG KASQSIPEID VYKYEPWDLA ELMFPDSPYQ PRAWFSFSRP DYKYANSRRC  120
NRASGKGFWK ITGKPRQVKS RQLPKSVTCK KRTLTFHEGR VPKSRNTGWV RQEYYLTPTD  180
PE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-20617610140Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_016652231.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016652231.11e-135PREDICTED: NAC domain-containing protein 74-like
TrEMBLA0A251N4Y41e-128A0A251N4Y4_PRUPE; Uncharacterized protein
TrEMBLM5VXC51e-129M5VXC5_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ060821e-130(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1714827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.12e-28NAC domain containing protein 52