PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016651384.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 182aa MW: 20904.4 Da PI: 7.0236 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 104.9 | 1e-32 | 16 | 151 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkya....tgkrknratk..sgyWkat 86 lp+GfrF Ptd+elv++yL +kv +++++++e+i+++d y+++P++L +++ +e+ew+fF+++d ++ +g+++ r++ g+Wk XP_016651384.1 16 LPVGFRFMPTDKELVTHYLMNKVFDRPVPAAEAIQDIDatqFYSTHPKNLV-TFSCGEREWFFFIHEDDENCsasaQGRKNIRVVGngVGFWKPN 109 79*************************998888888764448999*****6.777899*******99998872332344444544434789**** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 g+++++++++g++ k L++++g+ +k++kt+W m ey+l XP_016651384.1 110 GSENPIHNEDGNVYASKIFLTYFSGSLRKAKKTHWKMVEYHL 151 *****************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.49E-33 | 10 | 174 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 33.082 | 16 | 176 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.8E-18 | 17 | 151 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MEAEHGQGAM MSSGQLPVGF RFMPTDKELV THYLMNKVFD RPVPAAEAIQ DIDATQFYST 60 HPKNLVTFSC GEREWFFFIH EDDENCSASA QGRKNIRVVG NGVGFWKPNG SENPIHNEDG 120 NVYASKIFLT YFSGSLRKAK KTHWKMVEYH LHSDSHTEEE YQVQRREWVL GRLKRGNAYN 180 GL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-16 | 16 | 173 | 15 | 165 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_016651384.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016651384.1 | 1e-137 | PREDICTED: NAC transcription factor 29-like | ||||
TrEMBL | A0A314YR11 | 1e-132 | A0A314YR11_PRUYE; NAC transcription factor 29-like | ||||
STRING | XP_004301123.1 | 1e-76 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14439 | 12 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77450.1 | 1e-22 | NAC domain containing protein 32 |