PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_016646985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 145aa MW: 16578 Da PI: 10.0449 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.8 | 9.6e-12 | 48 | 82 | 2 | 40 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtae 40 +y+G+r +k +g+WvAeIr+p+ r+r++l +f t++ XP_016646985.1 48 QYRGIRMRK-WGKWVAEIREPNX---RTRIWLRSFTTPD 82 7******99.**********933...5********9965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF038123 | 1.3E-15 | 7 | 145 | IPR017392 | AP2/ERF transcription factor ERF/PTI6 |
Gene3D | G3DSA:3.30.730.10 | 2.0E-15 | 47 | 97 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.21E-14 | 47 | 95 | No hit | No description |
SMART | SM00380 | 1.8E-9 | 48 | 110 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.0E-5 | 48 | 79 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 12.918 | 48 | 82 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.51E-9 | 48 | 82 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 7.4E-5 | 49 | 60 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 7.4E-5 | 71 | 87 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0042538 | Biological Process | hyperosmotic salinity response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence Send to blast |
MEGEYCCSSS SSSSTTTTTS IEKRKQRQNQ QQQQQVGGNH DHRHQEKQYR GIRMRKWGKW 60 VAEIREPNXR TRIWLRSFTT PDGQQLHDMS AASIRKKATE VGAKVDAVET AHRSPISQSK 120 TTSSLVNSQK PDLNKYPDPE NSDEN |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_016646985.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016646985.1 | 1e-104 | PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF011-like | ||||
Swissprot | Q9SNE1 | 5e-27 | ERF11_ARATH; Ethylene-responsive transcription factor ERF011 | ||||
TrEMBL | A0A314ZEE7 | 1e-74 | A0A314ZEE7_PRUYE; Ethylene-responsive transcription factor ERF011 | ||||
TrEMBL | M5XH14 | 1e-74 | M5XH14_PRUPE; Uncharacterized protein | ||||
STRING | EMJ24776 | 2e-75 | (Prunus persica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1290 | 32 | 106 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50260.1 | 2e-28 | cooperatively regulated by ethylene and jasmonate 1 |
Publications ? help Back to Top | |||
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